Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g3028 ATGAATCTTCTTACCGATGAGATCAGAGGCAAATCAGAGGTATACAATGGAGATGAAATCTGCCAAGCAAAGTCCAAGGAACTTCTCTTGGAAATAAACCTACCAAATGGTCTTTTACCTTTGAAGGACATTGAAGAATGTGGTTATCATAGGGAGAGTGGTTTTGTTTGGCTTAAGCAGAAAGCAAGCTATACTCACAAGTTTGAGAAAGTTGATAGGCTTGTGACCTATGGTACTGAAGTCACTGCCACTGTTGAGGTTGGTAAGATCAAGAAGCTAACTGGTGTGAAGGTGAAGGAACTCTTGGTTTGGCTTCCACTGCATGAAATCCAGTTGGATGATCCACCAACTGGTAAAATCACTTTCAGGGCCATTACTGGACTTTTCAGAACTTTCCCTGCCTCAGCTTTTGAGATAGAAGAAGAACAAGTTAAGGATGTGAAGGAAGAGAACAAAGATCAAGTCAAAGAAGCAGAAGCACCTGCTGCTACTGCTGCTGCTGTTGAAGTCAAAGAGGTCTAA 522 0.4195 MNLLTDEIRGKSEVYNGDEICQAKSKELLLEINLPNGLLPLKDIEECGYHRESGFVWLKQKASYTHKFEKVDRLVTYGTEVTATVEVGKIKKLTGVKVKELLVWLPLHEIQLDDPPTGKITFRAITGLFRTFPASAFEIEEEQVKDVKEENKDQVKEAEAPAATAAAVEVKEV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g3028 173 SUPERFAMILY At5g01610-like 7 143 IPR036758 -
Mtr1g3028 173 PANTHER T31J12.3 PROTEIN-RELATED 2 161 IPR007493 -
Mtr1g3028 173 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Mtr1g3028 173 PANTHER PLANT/F25P12-18 PROTEIN 2 161 - -
Mtr1g3028 173 Gene3D - 7 149 IPR036758 -
Mtr1g3028 173 MobiDBLite consensus disorder prediction 150 173 - -
Mtr1g3028 173 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g3028 Mtr-Chr1 41470895 41471737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g3028 - - jre:108987755 223.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g3028 1 41470895 41471737 Mtr1g3028 1 41470895 41471737 ECH
Mtr7g3597 7 53000068 53000884 Mtr1g3028 1 41470895 41471737 PCT