Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2998 ATGGACGGTGATTCTTCTTGGTCTTCTCGTCTCTCTTCCGCTTCCAGACGTTATCAAGCCGCTCTTCAATCCCGATCAGATATGTTCATGGGTTTTGATGAGAACGACGCGGATGAAGATATAAGGGAAGAGTTTCTCTGTCCATTTTGTTCTGAGTATTTTGATATCGTTGGATTGTGCTGCCACATTGATGAAGAGCATCCAATGGAGGCAAAAAATGGGGTATGTCCGGTTTGTGCATTGAGGGTGGGGGTTGATATGGTTGCTCACATAACCCTACAACATGGAAGTATATTTAAGATGCAGCGCAAGAGGAAATCACGTAAAGGTGGATCTTATTCTACACTTTCATTATTGAGGAAGGAGCTGAGAGAAGGAAATTTGCAATCCCTTTTTGGCGGATCTCCATGTATAGTGTCCTCGTCTAATGCAGCACCTGATCCGCTGCTGTCGTCATTTATATCACCTTTAGGTAATGAATCTGCGAGTTCTCAGTCTCACACACATACTGAGACAAGATCATCCAAGAAATTATCAGACGAGGTTGTATCAAAAAGCCATGTAGAGACACCAACCATGTCAGTTAAGGACAAGGAGGAGAAGGCGAAAAGATGTGAGTTTGTTCAAGGACTGTTGATGTCCACAATATTTGATGACGATTTATGA 666 0.4279 MDGDSSWSSRLSSASRRYQAALQSRSDMFMGFDENDADEDIREEFLCPFCSEYFDIVGLCCHIDEEHPMEAKNGVCPVCALRVGVDMVAHITLQHGSIFKMQRKRKSRKGGSYSTLSLLRKELREGNLQSLFGGSPCIVSSSNAAPDPLLSSFISPLGNESASSQSHTHTETRSSKKLSDEVVSKSHVETPTMSVKDKEEKAKRCEFVQGLLMSTIFDDDL* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2998 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 HOMOLOG 4 1 219 - -
Mtr1g2998 221 MobiDBLite consensus disorder prediction 156 200 - -
Mtr1g2998 221 MobiDBLite consensus disorder prediction 170 184 - -
Mtr1g2998 221 Pfam Drought induced 19 protein (Di19), zinc-binding 43 96 IPR008598 -
Mtr1g2998 221 PANTHER PROTEIN DEHYDRATION-INDUCED 19 1 219 IPR033347 -
Mtr1g2998 221 Pfam Stress-induced protein Di19, C-terminal 116 216 IPR027935 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2998 Mtr-Chr1 41150080 41153065 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2998 - - gmx:100795155 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2998 1 41150080 41153065 Mtr7g3624 7 53212138 53217747 ECH
Mtr1g2998 1 41150080 41153065 Mtr1g2998 1 41150080 41153065 ECH
Mtr2g1252 2 13539812 13542853 Mtr1g2998 1 41150080 41153065 ECH