Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2856 ATGGATCAAAAACCTGAGCATGATGGAAACGATGAGTTGTCCTTTCCTGAACAAAACCATGAGTTGGTCCTATCGGAGAACAATGATTTGACTGTTTCAGAAAGCCAAGGATTTAATGAGAGCATGGACCTGGCTGTGGTTCAGAATCCCGAAATGAGCATCGAGTCTGCCAATGACATGGTTGTTTATCAGTCACAGTATATGCTTTCTTCTACACCTCATGTAGTTCAGGCTCGTACAGTTGATGTGATTCCAACTTATGAATTGTCGGTAGGCCAAGAATTTCCTAATGTCAAGAGTTGCCGAAGAGCATTGAGGGATACAGCAATTGTTCTGCACTTTGAGATGCAGACTATAAAATCCGACAAGACACGCTTTACTGCCAAATGTGCCAGTGAGGGTTGTCCCCGGCGCATTCATGCAGCAAAGCTCCCAGGGGTTCCAACTTTTACTATCAGGACAATTCGTGAGAGTCATACATGTGGAGGAATTTCTCATCTTGGTCATCAGCAAGCTTCAGTTCAGTGGGTTGCTAGCTCTGTGGAGCAAAGGTTGAATGAGAATCCTAATTGCAAGCCAAAGGAGATATTGGAAGAGATTCATAGGGTTCACGGTATCACCTTATCGTACAAGCAAGCATGGAGAGGCAAGGAGCATATCATGGCTGCAATGCGTGGATCTTTCGAAGAAGGGTATCGTTTGCTGCCACAATACTGTGCACATGTGAAACGCACAAACCCAGGAAGTATTGCATCTGTTTACGGAAATCCATCTGATAATTGCTTTCAACGCCTATTCATTTCTTTTCAAGCATCTATTTATGGACTTTTAAATGCATGTCGGCCACTCTTGGGGCTTGATAGAATATATCTTAAGAGCAAGTATCTTGGTACGTTACTTCTTGCTACGGGGTTTGATGGTGATGGGGCTCTCTTTCCTCTTGCATTTGGTGTTGTTGACGAGGAGAACGATGATAATTGGATGTGGTTTCTGTCTAAACTTCATAACCTGCTCGAGATTAATACTGAAAACATGCCAAGGCTTACTATTTTGTCTGATAGACAGCAGGGAATTGTGGATGGCGTTGAAGCAAATTTTCCCACTGCTTTCCATGGATTCTGTATGCGGCACTTAAGTGACAACTTCCGAAAGGAATTTAATAATACCATGCTGGTCAATCTTCTATGGGAAGCCGCCAATGCTCTTACTATAATTGAATTTGAAGGTAAAGTTATGGAAATTGAAGAGATATCACAAGATGCTGCATATTGGATTCGAAGAATTCCACCTCGTCTGTGGGCTACGGCTTATTTCGAGGGGCAGAGGTTTGGTCAAACAACGGCCAACATTGTTGAAGATTTAAACAGTTGGATATTAGAAGCATCTGGGCTTCCAATAATTCAAATGTTGGAATGCATTAGGAGGCAGCTAATGACTTGGTTATATGAGCGCCGAGAAACCAGTATGCAGTGGGCATCCGTACTTGTTCCTTCTGCTGAGAGACGTGTAACAGAGGCTATTGAACATGCACGCACATATCAGGTTCTTCGTGCCAACGACGCTGAGTTTGAAGTTATATCTCATGAGGGAACTAATATAATTGATATAAGAAATCGCTGCTGTCTTTGTCGTGGTTGGCAGCTTTATGGCTTGCCCTGTGCACATGCTGTGGCAGCACTTTTGTCTTGTAGACAAAATTTTCATAGATTCACAGAAAGTTGTTTCACTGTTGCAACATATCGCAAGACATACTCAGAAACCATACATCCCATTCCTGACAAATCTCTCTGGAAGGAGTTGTCTGAGGGGGATGCCAGTGTTAGCCAAGCTCTTGAAGTTGTTATTTACCCGCCTAAATCACTCAGGCCACCTGGGCGACCAAGAAAGAAGAGAGTTTGTGCAGAAGATCGCGGGCGTGTTAAGCGAGTGGTACATTGTAGTCGCTGCAATCAAACAGGTCACTTTAGAACAACATGTGCTGCCCCCATCTAA 1992 0.4347 MDQKPEHDGNDELSFPEQNHELVLSENNDLTVSESQGFNESMDLAVVQNPEMSIESANDMVVYQSQYMLSSTPHVVQARTVDVIPTYELSVGQEFPNVKSCRRALRDTAIVLHFEMQTIKSDKTRFTAKCASEGCPRRIHAAKLPGVPTFTIRTIRESHTCGGISHLGHQQASVQWVASSVEQRLNENPNCKPKEILEEIHRVHGITLSYKQAWRGKEHIMAAMRGSFEEGYRLLPQYCAHVKRTNPGSIASVYGNPSDNCFQRLFISFQASIYGLLNACRPLLGLDRIYLKSKYLGTLLLATGFDGDGALFPLAFGVVDEENDDNWMWFLSKLHNLLEINTENMPRLTILSDRQQGIVDGVEANFPTAFHGFCMRHLSDNFRKEFNNTMLVNLLWEAANALTIIEFEGKVMEIEEISQDAAYWIRRIPPRLWATAYFEGQRFGQTTANIVEDLNSWILEASGLPIIQMLECIRRQLMTWLYERRETSMQWASVLVPSAERRVTEAIEHARTYQVLRANDAEFEVISHEGTNIIDIRNRCCLCRGWQLYGLPCAHAVAALLSCRQNFHRFTESCFTVATYRKTYSETIHPIPDKSLWKELSEGDASVSQALEVVIYPPKSLRPPGRPRKKRVCAEDRGRVKRVVHCSRCNQTGHFRTTCAAPI* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2856 663 Pfam MuDR family transposase 89 152 IPR004332 -
Mtr1g2856 663 PANTHER POLYPROTEIN, PUTATIVE-RELATED 7 662 - -
Mtr1g2856 663 Pfam SWIM zinc finger 535 563 IPR007527 GO:0008270
Mtr1g2856 663 SMART 26again6 539 566 IPR006564 GO:0008270
Mtr1g2856 663 ProSiteProfiles Zinc finger SWIM-type profile. 523 564 IPR007527 GO:0008270
Mtr1g2856 663 Pfam MULE transposase domain 284 381 IPR018289 -
Mtr1g2856 663 PANTHER OS12G0597300 PROTEIN 7 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2856 Mtr-Chr1 39746433 39749645 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2856 - - gmx:100811471 1199.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2856 1 39746433 39749645 Mtr1g2856 1 39746433 39749645 ECH