Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2852 ATGCGCATGCGGTGGTTCCTTCCAAACCCTATCAAAACCCTTCCAATCATCAACACCATCCGTTCTTCAATCTCATTTCGAACCTTCGTTCCTTTCAATTCAAGATCGTTCCATAGAAACCGAATCCAAATGGCAGCAATTCACAATCACAGTGAAGCTGGACTTGCGAAGCGTTTCTGGATCAAATTCAATCGTGAATCCATCTTCTCTATGTATACTCCTTTTGTTATCTCTTTAGCTTCCGGTAACTTGAAGATCGATTCTTTCCGCCATTACATCGCTCAAGATGTTCATTTTCTTCGCGCTTTTGTTCAAGCGTATGAGTCGGCTGAAGACTGTTCTGACGACGATGACGATAAGCTTGGACTCTCCCAGTTGAGGAAGAATGTTTTAGAGGAGCTGAAGATGCATGACTCACTGGTAAAGGAATGGGGATTGGACCTTGCCAAAGAGCACAGTATTAACTCAGCAACAGTTAAGTATACAGACTTTCTGTTGGCTACTGCTTCTGGGAAGATTGAAGGACTGAAAAGTTCTGGTAAACTTGCAACACCATTTGAGAAAACCAAAATTGCTGCTTATACTTTAGGTGCCATGACTCCTTGCATGAGGCTGTATGCCTTTCTTGGTAAAAAGTTCAAGGAACTTCCAGACCTCGAAGAAAGTACTCACCCGTATAGCAAGTGGATCGACAACTATTCCTCTGATGGTTTCCAGGCTTCTGCTCTGCGAACCGAAGAATTGCTCGACAAACTAAGTGTCTCTTTAACTGGCGAAGAACTCGATGTCATTGAAAAGCTTTATTACCAGGCAATGAAGCTTGAAATAGACTTCTTCACTGCTCAACCACTCTTTCAGCCAACTATAGCACCCTTGACTAAAGGACATAACCTTGAAGAAGATCGTCTCGTGATTTTTTCCGATTTTGATTTAACATGCACTGTTGTTGATTCATCTGCCATCTTGGCAGAAATTGCTATAGTGACAGCACCAAAATCCGACAATCAGCCTGAAGATCAAACAGCTCGAATGTTGTCTTCTGACCTCAGGAACACATGGGGTTCTCTATCCAAACAGTATACAGAGGAGTATGAGCAATGTATAGAAAGCATTATGCCTGCCAATAAATTGGAAAATTTTGATTATAAACAACTGTCTACAGCACTTGAGCAACTTTCGAAATTCGAGAACTCAGCAAATAATAGGGTTGTTGAGTCCGGGGTTCTTAAGGGTATAAATATAGAAGATGTAAAGCGTGCTGGAGAGCGTTTGATTCTTCAGGATGGTTGCACTGACTTTTTTAAGAGAGTTGTAAAGAATAAAAATTTGAATGCCAATGTGCATGTTCTTTCATACTGCTGGTGTGGTGACCTAATTAGGTCTGCTTTCTCTTCAGCTGATTTAAATGAGATGGATGTTCATGCTAACGAGTTCAGTTATGACGGATCTGTTTCTACCGGCGACATTGTTAAGAAGGTGGAGTCTCCCATTGACAAGGTCCAGGCTTTTCGTAATATATTGGAAAATTGCAATGATGACAAGAAAAAATTAACTGTTTACATTGGAGACTCGGTGGGTGATTTACTTTGTCTACTTGAAGCAGATGTAGGAATTGTGATTGGTTCAAGTTCAAGCCTTAGGACCATAGGGACACAATTTGGTGTTTCATTTGTCCCATTGTTTTCTGGCTTGGTTAAGAAACAGAAAGAATACAACGAAGAAAGCTCTTCCAATTGGAAGGGTTTATCTGGCATTCTTTACACAGTCTCTAGTTGGGCTGAAGTGCATGCTTTTGTTTTGGGTTGCTAG 1809 0.4107 MRMRWFLPNPIKTLPIINTIRSSISFRTFVPFNSRSFHRNRIQMAAIHNHSEAGLAKRFWIKFNRESIFSMYTPFVISLASGNLKIDSFRHYIAQDVHFLRAFVQAYESAEDCSDDDDDKLGLSQLRKNVLEELKMHDSLVKEWGLDLAKEHSINSATVKYTDFLLATASGKIEGLKSSGKLATPFEKTKIAAYTLGAMTPCMRLYAFLGKKFKELPDLEESTHPYSKWIDNYSSDGFQASALRTEELLDKLSVSLTGEELDVIEKLYYQAMKLEIDFFTAQPLFQPTIAPLTKGHNLEEDRLVIFSDFDLTCTVVDSSAILAEIAIVTAPKSDNQPEDQTARMLSSDLRNTWGSLSKQYTEEYEQCIESIMPANKLENFDYKQLSTALEQLSKFENSANNRVVESGVLKGINIEDVKRAGERLILQDGCTDFFKRVVKNKNLNANVHVLSYCWCGDLIRSAFSSADLNEMDVHANEFSYDGSVSTGDIVKKVESPIDKVQAFRNILENCNDDKKKLTVYIGDSVGDLLCLLEADVGIVIGSSSSLRTIGTQFGVSFVPLFSGLVKKQKEYNEESSSNWKGLSGILYTVSSWAEVHAFVLGC* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2852 602 CDD TenA_C_AtTH2-like 55 281 - -
Mtr1g2852 602 PANTHER AMINOPYRIMIDINE AMINOHYDROLASE, MITOCHONDRIAL ISOFORM X1-RELATED 48 601 - -
Mtr1g2852 602 Gene3D - 45 282 IPR016084 -
Mtr1g2852 602 SUPERFAMILY HAD-like 290 558 IPR036412 -
Mtr1g2852 602 Gene3D - 302 552 IPR023214 -
Mtr1g2852 602 Pfam TENA/THI-4/PQQC family 193 281 IPR004305 -
Mtr1g2852 602 Pfam TENA/THI-4/PQQC family 74 171 IPR004305 -
Mtr1g2852 602 SUPERFAMILY Heme oxygenase-like 73 280 IPR016084 -
Mtr1g2852 602 PANTHER BIFUNCTIONAL TH2 PROTEIN 48 601 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2852 K22911 - gmx:100788250 962.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2852 1 39694441 39700749 Mtr1g2852 1 39694441 39700749 ECH