Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2843 ATGAATGTTTCCCAATATTCCACCACCATCTTCTTCATTAGTTACACTTTCTTGCTCTTCCTACCTTCTTCTGAACCAATTTCCAATTACAACAAATTAGTATACAAAACATGCTCAACTCAAACCTTCAACCATCAATCTTATTCTCAATCACTCAATTCCTTATTCCAACAATTCATAACACAATCTTCCCAATACAAGTTCTTCAAAACCAACGAAGCAATCAACGACGACACCTTCATCTCCGGCTTTTTTCAATGCAGAAACGACTTCACCAAAGAAGATTGTTTCGCATGTGTAACATCTTTACTTCCTCATATATCAAATACTTTGTGCAGTGATTCCACATCGGCACGAGTACAACTTCAAGGTTGCTACGTTCAATATCAAACTGAACAATTTCAAGAAACAACTATTCATGAATCCGAAAATAACAATATGTTTCACAAGATTTGTGGAGTGCCTGTTGTAGAGTATTATTTTGAGTTTAAAGAGTTGATGAACGAGGCATTCATGATACTAGAAAATGGGATTGTAAATAGTGATGGGTTTTACACAATGAAGTATAAAAAGGTGAAATTGATGGCACAATGTGAAGGTGATTTGAGAAGTTGTGAATGTGGTGAATGTGTTGGTAATGCAGTGATGGTTGCCAAGGAAGAATGTAGTAGTTCAGTTTCTGCAGAAATATATTTTGATAAGTGTTTTATAAGCTACACATACATGCCCAAATCAAATGGTGATGCTAACAACACTGTCCCAGGGGCACGCAGAAAGAACAACCCCCAAAAGTTGATAGCAATAATTGTTGGAGGGGGTGCAATTTTGTTTATGGGTCTTATAGTTGTATCGTTGATCAACTCTCGGCTTAAAAAAGATGACTACGAGTAG 891 0.3648 MNVSQYSTTIFFISYTFLLFLPSSEPISNYNKLVYKTCSTQTFNHQSYSQSLNSLFQQFITQSSQYKFFKTNEAINDDTFISGFFQCRNDFTKEDCFACVTSLLPHISNTLCSDSTSARVQLQGCYVQYQTEQFQETTIHESENNNMFHKICGVPVVEYYFEFKELMNEAFMILENGIVNSDGFYTMKYKKVKLMAQCEGDLRSCECGECVGNAVMVAKEECSSSVSAEIYFDKCFISYTYMPKSNGDANNTVPGARRKNNPQKLIAIIVGGGAILFMGLIVVSLINSRLKKDDYE* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2843 296 Pfam Salt stress response/antifungal 183 240 IPR002902 -
Mtr1g2843 296 Pfam Salt stress response/antifungal 38 131 IPR002902 -
Mtr1g2843 296 ProSiteProfiles Gnk2-homologous domain profile. 145 244 IPR002902 -
Mtr1g2843 296 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Mtr1g2843 296 Gene3D - 150 243 IPR038408 -
Mtr1g2843 296 Gene3D - 30 134 IPR038408 -
Mtr1g2843 296 PANTHER PLASMODESMATA-LOCATED PROTEIN 4 5 295 - -
Mtr1g2843 296 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 295 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2843 10 296 Receptor kinase-like Gene Family AT5G40380 23.906 3.16e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2843 - - gmx:100795973 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2843 1 39581745 39582876 Mtr1g2843 1 39581745 39582876 ECH
Mtr7g2942 7 46222528 46224095 Mtr1g2843 1 39581745 39582876 PCT