Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2812 ATGGATATTGTTGGGAGAAAGAGAAGGTGTTTCTGTTCCACTCTACATCTTCTTCTTCTGACTTTCTTCATTGCCATACTTCTACAAAGAGGTACTGTGGCTGAATCATCCAGCATCCAAAACTACACAAGGTATAGACAAATTAGTAGCTTGAGGCTTGAAAGGATTAATAAGCACTTGGAAAAGATTAACAAGCCTCCTGTTCTCACCATTGAGAGCCCAGATGGAGATCTTATAGATTGTGTCCACAAAAGAAAACAACTAGCTTTGGATCACCCACTTTTAAAGAATCACAAGATCCAGAAAGTACCAAGTGAAATGCCAAGAGGTATGAAAATGGAGAGAGATGAGAATGTTGATAGTGATAATATTACTAAGACTAATGTGGAAGTGGGAAAAGGAAAAGAGGGGGTAAGAAACAACGCATGGCAAATGTGGCATCGAAATGGGACAAGGTGTCCAAAGGGAACGGTTCCTATGCGGAGGAGTACAGTACATGATGTGTTGAGAGCAAAATCTTTGTATGATTATGGTAAGAAACGAACACAAATTCCACTCTCTCGGAGCAGTGATGCACCTGATGTATTCTCTGGCAATGGTCATGAGCATGCGATCGCGTACACAGGATCATCACAAGAGATCTACGGTGCAAAAGCATCAATAAGTGTGTGGGATCCATCAATTGAAGTGATGAACGAGTTCAGTCTCTCTCAAATTTGGGTCCTCTCTGGTTCTTTCGATGGTCCTGATCTTAACAGCATCGAAGCTGGATGGCAGGTCAGTCCGGAGCTTTATGGTGACAACAGACCCAGATTATTCACGTATTGGACGAGTGACTCTTATCAAGCAACCGGATGTTACAATCTTCTTTGTGCTGGTTTTATTCAAACAAATAGTAAAATAGCTATTGGAGCTGCCATATCTCCTGTCTCTTCTTATACTGGCAACCAATATGACATTTCAATCCTCATTTGGAAGGATCCAAGAGTCGGGAATTGGTGGATGAGTTTTGGCGACAACACATTGGTAGGGTATTGGCCAGCAGAGCTATTTACACACTTAGCCGATCACGCCACCATGGTAGAATGGGGTGGCGAGGTGGTGAACTCACGGACCGACGGCCGACACACCTCCACTCAGATGGGTTCCGGCCACTTTGCCGAGGATGGTTTCGGAAAAGCAAGCTACTTTCGGAACCTTGAGATTGTGGACATTGATAACACTCTTAGCTCAGTACAAAGCATCTCAACCTTGGCTGAAAATACAAATTGTTATGATATTCAAAACTCCTATAGCAACGAATGGGGCACATACTTCTATTATGGTGGGCCTGGGAATAATCCTAAGTGTCCATGA 1356 0.4322 MDIVGRKRRCFCSTLHLLLLTFFIAILLQRGTVAESSSIQNYTRYRQISSLRLERINKHLEKINKPPVLTIESPDGDLIDCVHKRKQLALDHPLLKNHKIQKVPSEMPRGMKMERDENVDSDNITKTNVEVGKGKEGVRNNAWQMWHRNGTRCPKGTVPMRRSTVHDVLRAKSLYDYGKKRTQIPLSRSSDAPDVFSGNGHEHAIAYTGSSQEIYGAKASISVWDPSIEVMNEFSLSQIWVLSGSFDGPDLNSIEAGWQVSPELYGDNRPRLFTYWTSDSYQATGCYNLLCAGFIQTNSKIAIGAAISPVSSYTGNQYDISILIWKDPRVGNWWMSFGDNTLVGYWPAELFTHLADHATMVEWGGEVVNSRTDGRHTSTQMGSGHFAEDGFGKASYFRNLEIVDIDNTLSSVQSISTLAENTNCYDIQNSYSNEWGTYFYYGGPGNNPKCP* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2812 451 Pfam Neprosin 232 444 IPR004314 -
Mtr1g2812 451 PANTHER PROTEIN, PUTATIVE (DUF239)-RELATED-RELATED 14 449 - -
Mtr1g2812 451 PANTHER CARBOXYL-TERMINAL PEPTIDASE 14 449 - -
Mtr1g2812 451 Gene3D - 226 342 - -
Mtr1g2812 451 Pfam Neprosin activation peptide 70 207 IPR025521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2812 Mtr-Chr1 39292909 39297421 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2812 - - gmx:100808774 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2812 1 39292909 39297421 Mtr1g2812 1 39292909 39297421 ECH