Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2809 ATGGCTAGTTCTGTAGTGTTTAGGTGTTGTTTAATAGTGATAACAAATTTGTTTATGGCCTTTGATTTTGCTCATGCTCAACCAACAAGAGCTTTTTTCGTTTTTGGTGATTCACTAGCAGATAATGGCAACAATCATTTATTATTTACCACATTACGTGCTGATTTTCCCCCATATGGAATTGATTACCCTACACACAAACCCACCGGACGTTTCTCTAATGGCCTAAATATTCCTGACATAATCAGTGAGCAACTTGGTTTAGAACAGACTCTCCCTTATTTGAGTCCCTTGCTACTTGGTGAAAAACTTTTAGTTGGTGCCAATTTTGCTTCTGCGGGCGTTGGAATTCTTAATGATACAGGAATTCAATTTCTGCAAATCTTACACATTCACAAGCAATTGAAGTTATTCGAACAATACCAGCGAAGGTTGAGAGCACATATTGGTGCAGAGGAAGCTAAGAAACTAGTCAACAAAGCACTTGTACTCATCATTATTGGAGGCAACGATTTTGTTAACAATTATTATTGGGCCCCATTTTCAGCAAGATCTCGCCAATTTTCTCTTCCAGACTACGTGACATATGTCATATCTGAATTCAAAAATATTCTAAAGAAATTTTATGATTTGGGAGGTCGTAATGTTCTTGTAATGGGCATGGGACCAATGGGATGTTGTATTCCTATAGAGTTACCTTTATGGAGTAATAACGGTGATTGTGATGTTGAACTCGTGAGTGCTGCCTCTTTATATGATCGACAATTTGTCGAAATGATCAAAGAACTCAACACAGAGATTGGTGCTGATGTCTTCATTGCTATTACTGCACATAAACTGTTCATGGATTTTGTTAACAACCCTCAAGCTTTTGGATTTGTTACATCAAAGAAAGCTTGTTGTGAGTATGGCCCATACAATGGGATTAAATTATGCACACCTCTTGCAAACTTGTGCCAAAATCGAGACCTCTATGCATTTTGGGATTCAATCCATCCATCTGAAAAAGCTTGCAGAATCATAGTCCAACAAATCTTGAATGGCTCCAATGAGTATATGTACCCTATGAATCTTAGCACTGTTCTGGCCATGGATCCCATGGTTTGA 1107 0.3803 MASSVVFRCCLIVITNLFMAFDFAHAQPTRAFFVFGDSLADNGNNHLLFTTLRADFPPYGIDYPTHKPTGRFSNGLNIPDIISEQLGLEQTLPYLSPLLLGEKLLVGANFASAGVGILNDTGIQFLQILHIHKQLKLFEQYQRRLRAHIGAEEAKKLVNKALVLIIIGGNDFVNNYYWAPFSARSRQFSLPDYVTYVISEFKNILKKFYDLGGRNVLVMGMGPMGCCIPIELPLWSNNGDCDVELVSAASLYDRQFVEMIKELNTEIGADVFIAITAHKLFMDFVNNPQAFGFVTSKKACCEYGPYNGIKLCTPLANLCQNRDLYAFWDSIHPSEKACRIIVQQILNGSNEYMYPMNLSTVLAMDPMV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2809 368 SUPERFAMILY SGNH hydrolase 26 347 - -
Mtr1g2809 368 Pfam GDSL-like Lipase/Acylhydrolase 33 344 IPR001087 GO:0016788
Mtr1g2809 368 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 20 363 - -
Mtr1g2809 368 Gene3D SGNH hydrolase 18 351 IPR036514 -
Mtr1g2809 368 PANTHER LIPASE/ACYLHYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 20 363 - -
Mtr1g2809 368 CDD SGNH_plant_lipase_like 31 349 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2809 Mtr-Chr1 39244877 39253353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2809 31 362 Acyl Lipid Metabolism Gene Families AT4G10950 32.132 2.91e-52 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2809 - - gmx:100500155 534.643
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2809 1 39244877 39253353 Mtr1g2809 1 39244877 39253353 ECH