Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2806 ATGCATTCATGTTACAGTTACGGCTCCACTTACATCCCCTTCAAATTAAACCGCTTAACTCCTCGAACCGGACCAGTTCGAGCAGCGCTATCTTCTCCAGAGAAGCGAACCAGAAAGAAGAAGCAAGTGAAAGATGATGACACTTTACTTGAGAACAGTCTCCGGTTCAGTTTCATGGAAGAGCTCATGAACCGGGCTAGGAACCGTGACTCAACCGGAGTTTCTCAAGTTATGTATGATATGATTGCTGCTGGTTTGAGTCCTGGTCCTCGCTCGTTTCATGGTTTGGTTGTTTCCTATGCTCTTAATGGCAATGAACAAGCCGCGATGGATTCGTTGAGGAGAGAGTTAGGTGCAGGGCTTCGACCGATTCATGAAACTTTCGTTGCATTGGTGAGATTGTTTGGGTCTAAAGGTCATTCAACTAGAGGTTTAGAGATACTTGGAGCTATGGAAAACCTAAATTATGATATTCGTCATGCTTGGATAATTCTTATTGAGGAACTTGTTCGGAACAAGCATTTGGAAGATGCTAACAAAGTGTTCTTGAAGGGTGCTAAGGGTGGCCTCAGGGCTACTGATGAACTTTATGATCTCCTAATTGAGGAAGATTGCAAAGCTGGAGATCATTCTAATGCTTTGGAAATTTCGTATGAGATGGAAGCTGCTGGACGAATGGCAACAACATTCCATTTTAATTGCCTACTTTCTGTGCAGGCTACCTGCGGAATACCTGAAATAGCCTTTACAACATTTGAGAACATGGAATATGGAGAAGATTATATGAAGCCTGATACAGAAACATACAATTGGGTCATTCAAGCGTATACTAGAGCCGACTCTTATGACAGAGTTCAAGATGTCGCTGAGTTGCTTGGCATGATGGTTGAAGATCATAAGCGTGTACAGCCAAATGTGAAGACCCATGCGCTGTTAGTGGAGTGTTTTACCAAGTACTGTGTAGTACGAGAAGCTATCAGGCATTTCCGAGCACTTAAAAACTTTGAAGGGGGTACAAAAATTCTTCATATGGATGGGAACCACGGAGATCCTCTTTCTTTGTACCTTCGGGCATTGTGTCGGGAAGGAAGGATTATTGACATGCTTGAAGCATTAGAAGCTATGGCCAACGATAACCAGCAAATCCCCCCACGGGCAATGATCTTGAGCAGAAAATACCGGACATTAGTGAGCTCATGGATTGAACCTTTACAAGAGGAGGCTGAACTTGGTTATGAGATTGATTATATTGCTAGATATGTTGAAGAAGGTGGCCTTACTGGAGAGCGCAAACGGTGGGTGCCCCGAAGTGGTAAAACACCTCTAGATCCTGATGCTGATGGATTTATATATTCAAACCCAATGGAGACTTCCTTCAAACAAAGATGCCTTGAGGAGAAGAAGGTGTACCATAAGAAGCTTCTGAAGAAGTTGCGGTATGAAGGAATTGTAGCTTTAGGGGATGGTGCATCTGAATCCGATTATGTTAGAGTGATTGAGTGGCTAAAGAAAATCATAAAGGGGCCTGAACAGAATGCATTAAAGCCTAAGGCGGCTAGTAAAATGCTTGTGAATGAATTGAAGGAAGAACTAGAAGCACAAGGTTTACCAATCGATGGAACCAGAAATGTTCTTTACCAGCGTGTTCAGAAAGCAAGGAGAATAAATCAATCTCGTGGTCGGCCGCTTTGGGTTCCTCCCATTGAAGTGGAAGAAGAAGAGGTGGATGAAGAGCTGGAAGCATTGATCTCACGCATAAAGCTGGAGGAAGGAAATACAGAGTATTGGAAACGTCGCTTCTTAGGAGAAGGCTTAAATGGTGATAATGGAAATGCAATGGATGAAGGTGAATCAGAGTCCCCTGATGTTCAAGATTATATTGATGTTGTAGGGGATGATGCAAAAGAGGCTGAAGATGATGAAGCAGATGAGGACGAGGAGGAGGAAGTAGAACAGATAGAAGAGGAAATAGCACAAGTAGAGAACCAAGATGTAGAGAGGATAAAGGAAAAGGAAGTTGAATCTAAAAAACCCCTTCAAATGATTGGAGTCCAGCTGTTGAAAGATTCTAATGAACCCTCTGCCACTTCTAAAAAGTCAAGTAGAAGAAGATCAAGACGGAATATGGTCGATGATGATGCCGACGATGATTGGTTTCCTTTGGACATATTTGAGGCATTTAAGGAAATGAGGAATCGAAGAGTGTTTGATGTATCAGACATGTATACCTTAGCAGATGCTTGGGGATGGACATGGGAGAAAGAACTGAAGAACAGACCTCCTCATAGGTGGTCACAGGAATGGGAAGTCGATTTGGCAATCAAAGTTATGCAGAAGGTCATACAATTGGGAGGGACGCCAACTATTGGAGATTGTGCCGTGATCTTGCGTGCGGCTATAAGTGCACCTCTACCTTCAGCTTTCTTGACAATTTTGCAGACAACTCATGGTCTTGGTTATAAGTTTGGGAGACCGCTTTATGACGAGGTCATCTCTCTCTGCCTTGATCTTGGGGAACTAGATGCAGCTGTTGCCGTTGTGGCAGACTTGGAGACCACGGGGATCTTGGTTTCAGACCAGACTCTGGACAGGGTGATTTCTGCTAAACAGGGGATTGACAATCCTTCAAATGATGGCATGGATGCTGGACTGTAA 2655 0.4354 MHSCYSYGSTYIPFKLNRLTPRTGPVRAALSSPEKRTRKKKQVKDDDTLLENSLRFSFMEELMNRARNRDSTGVSQVMYDMIAAGLSPGPRSFHGLVVSYALNGNEQAAMDSLRRELGAGLRPIHETFVALVRLFGSKGHSTRGLEILGAMENLNYDIRHAWIILIEELVRNKHLEDANKVFLKGAKGGLRATDELYDLLIEEDCKAGDHSNALEISYEMEAAGRMATTFHFNCLLSVQATCGIPEIAFTTFENMEYGEDYMKPDTETYNWVIQAYTRADSYDRVQDVAELLGMMVEDHKRVQPNVKTHALLVECFTKYCVVREAIRHFRALKNFEGGTKILHMDGNHGDPLSLYLRALCREGRIIDMLEALEAMANDNQQIPPRAMILSRKYRTLVSSWIEPLQEEAELGYEIDYIARYVEEGGLTGERKRWVPRSGKTPLDPDADGFIYSNPMETSFKQRCLEEKKVYHKKLLKKLRYEGIVALGDGASESDYVRVIEWLKKIIKGPEQNALKPKAASKMLVNELKEELEAQGLPIDGTRNVLYQRVQKARRINQSRGRPLWVPPIEVEEEEVDEELEALISRIKLEEGNTEYWKRRFLGEGLNGDNGNAMDEGESESPDVQDYIDVVGDDAKEAEDDEADEDEEEEVEQIEEEIAQVENQDVERIKEKEVESKKPLQMIGVQLLKDSNEPSATSKKSSRRRSRRNMVDDDADDDWFPLDIFEAFKEMRNRRVFDVSDMYTLADAWGWTWEKELKNRPPHRWSQEWEVDLAIKVMQKVIQLGGTPTIGDCAVILRAAISAPLPSAFLTILQTTHGLGYKFGRPLYDEVISLCLDLGELDAAVAVVADLETTGILVSDQTLDRVISAKQGIDNPSNDGMDAGL* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2806 884 MobiDBLite consensus disorder prediction 695 711 - -
Mtr1g2806 884 Gene3D SAP domain 507 562 IPR036361 -
Mtr1g2806 884 Gene3D Tetratricopeptide repeat domain 57 216 IPR011990 GO:0005515
Mtr1g2806 884 PANTHER - 22 805 - -
Mtr1g2806 884 MobiDBLite consensus disorder prediction 32 46 - -
Mtr1g2806 884 Pfam SAP domain 520 552 IPR003034 -
Mtr1g2806 884 SMART sap_9 519 553 IPR003034 -
Mtr1g2806 884 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE 3 22 805 - -
Mtr1g2806 884 SUPERFAMILY SAP domain 519 556 IPR036361 -
Mtr1g2806 884 ProSiteProfiles SAP motif profile. 519 553 IPR003034 -
Mtr1g2806 884 Coils Coil 636 670 - -
Mtr1g2806 884 MobiDBLite consensus disorder prediction 682 711 - -
Mtr1g2806 884 MobiDBLite consensus disorder prediction 25 46 - -
Mtr1g2806 884 Gene3D Tetratricopeptide repeat domain 229 403 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2806 70 333 Glycosyltransferase AT1G05670 21.978 9.47e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2806 - - ccaj:109815736 1384.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2806 1 39223326 39232469 Mtr1g2806 1 39223326 39232469 ECH