Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2802 ATGAATCCACCACCGGCACAGTTACCACCACCGTCACAACTACCACCACCACTTTCACCACCTCCACAACAACATCCACCGCCATTACTACCACCACCACCACCCCTAAACCTCAACACAACCCTCTCCTCTCTCACCAACCTCCTCACCTTCTCCACCCAAATCCTCTCAACAACCCCCCAACCCCAAACCCCAACCACCAATCTCATCCCCTGCCTTTTCAATCCCAACCATCTCATCCCACCACCGTCCCTCTTCCTCCACCACCTCCGCTGCCCTTCCTCTCCTCGTCCTCTCCCTCACATCGATCATCTCCTCACTTCTCTCTCTTACCCTAAAACCCTCCAAAACCCTACCTCCATTCACCTCTCTTCTTACCTCGATTTCACAAACTTTTTCTACAACAATTGCCCCGGCGTCGTTACCTTTTCCGACGCTAACTCCGTCGCTCAAACCGCCACATTTCACCTCCCTGATTTTTTATCTCGAGAATGTTCTACCGTGTGCTCACCCACACCCAATCATAAACCTTCTCCCATTGTTCCTTCTGAATACTATTACATTACCCGCGAAATTGAATCATGGAACAATTTTCCAATTACATACTCAAACTCTGTTTTTCGCGCAATTTTTGGTATTGGAATTGCAAAAGAGAGTGAAATGGTGAACTGGTTGTTATCGAATTCGTCTCGATATGGCATTGTAATTGATACATCTATGCAGAAACATATTTTTTTGCTGTTTTGTTTAGGTTTCAAAGCAATTCTTAGAGATGCTTTTCTTTTGAATAATGTGTTAATGTGGTTAGAATCTCAGGTTTCAATTCTGTATGGTGTTAGTGGAAAATTGTTTGTTCTTAATTTTGTGAAGAAATGTATTCTGGTTGGTGCTTCGGCTCTGCTTTTGTTTCCGTTAGGGAACGAGGGTGGTGAGTCTGTTGGTTCGAAGGAAGGAAAGAGTGACACCAATTGTATTAGGGAGAGGAAAATTTTGATGCCGCAAGTTGTTGCTGCTGTTGCGGCGTTGCACGAACGAGCTTTGCTTGAACGTAAAATTAAGGAATTTTGGTTTTCTCATCCGTCAAATAACTATCAGCTGAAAGCTGAGCATTGTTATTTATCTGACAAAGCTAAGGAAGAGCGGAATAAGCGTGCTGATTATAGACCTATAATTGAGTATGATTGGGTTCATCAGCAGCATTCACATCACCAGGAAACACAAAAAGAGAAGACACGAGAGGAGTTACTGGCTGAAGAAAGGGATTATAAACGTCGAAGAATGTCTTATCGGGGCAAGAAAAGAAATCAATCAACTATACAGGTGATGAGGGACCTGATAGGGGAATACATGGAGGAAATCAAGCTGGCTGCAGGTGTTAAGAGCCCTGTCAATGTTTCTGAAGACAGTGGGATGCCTCCACCTCCGCCTAAACTTCTTTCTAGTCACACGATTTCTACGGAAGCCAATAATTCAAGAGAAGTTAGTCATGACTCACCTGCAGTGACAATCAGTAACCCAGATCATCACGAGCAACAATCTCACACAAATTATTCTGACAAAAGCAAAGTTGTACATGATGCTACTTCTAGAGATTATGAACAACGTAAACAAGGACATCAGGGGAGTCACCATCATGGAGGAGATGAACGAGGTACTGATCAAGAAAACCATAGGAGTCATGCGTCAACAAGCCCTGAAAGACATAGAAGTCGTAGTCGATCACATGAGCATAGAGTTCATCATGAGAAACAAGATTACTCAGGTAGAAAGAAGTATAATAACTCGTCAAGAACCAAGGATAGGTGGCAAAATGACACACACAAGAATCACACATCAGATTCTTTCTCAAGAAGTGATCCTTCAGAATCTCGTGGTGTTGGGGAGCATGATATCTCATCTGATGACAAATATATCAAGCCAGATAAATTTTAG 1932 0.4312 MNPPPAQLPPPSQLPPPLSPPPQQHPPPLLPPPPPLNLNTTLSSLTNLLTFSTQILSTTPQPQTPTTNLIPCLFNPNHLIPPPSLFLHHLRCPSSPRPLPHIDHLLTSLSYPKTLQNPTSIHLSSYLDFTNFFYNNCPGVVTFSDANSVAQTATFHLPDFLSRECSTVCSPTPNHKPSPIVPSEYYYITREIESWNNFPITYSNSVFRAIFGIGIAKESEMVNWLLSNSSRYGIVIDTSMQKHIFLLFCLGFKAILRDAFLLNNVLMWLESQVSILYGVSGKLFVLNFVKKCILVGASALLLFPLGNEGGESVGSKEGKSDTNCIRERKILMPQVVAAVAALHERALLERKIKEFWFSHPSNNYQLKAEHCYLSDKAKEERNKRADYRPIIEYDWVHQQHSHHQETQKEKTREELLAEERDYKRRRMSYRGKKRNQSTIQVMRDLIGEYMEEIKLAAGVKSPVNVSEDSGMPPPPPKLLSSHTISTEANNSREVSHDSPAVTISNPDHHEQQSHTNYSDKSKVVHDATSRDYEQRKQGHQGSHHHGGDERGTDQENHRSHASTSPERHRSRSRSHEHRVHHEKQDYSGRKKYNNSSRTKDRWQNDTHKNHTSDSFSRSDPSESRGVGEHDISSDDKYIKPDKF* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2802 643 ProSiteProfiles Zinc finger CHHC U11-48K-type profile. 69 96 IPR022776 -
Mtr1g2802 643 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 48 KDA PROTEIN 1 622 IPR032845 -
Mtr1g2802 643 MobiDBLite consensus disorder prediction 463 643 - -
Mtr1g2802 643 MobiDBLite consensus disorder prediction 1 36 - -
Mtr1g2802 643 MobiDBLite consensus disorder prediction 480 511 - -
Mtr1g2802 643 MobiDBLite consensus disorder prediction 512 570 - -
Mtr1g2802 643 MobiDBLite consensus disorder prediction 578 643 - -
Mtr1g2802 643 PANTHER UNCHARACTERIZED 1 622 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2802 K13156 - gmx:100803944 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2802 1 39180473 39183709 Mtr1g2802 1 39180473 39183709 ECH