Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2778 ATGAGCATGACCCAATTTGCTATGGTTGAGGAGTTGGCTTTTCTTGTGAAGGACAATCTTCCTTGCAAGCATCTCGTTCTTACAATGGAAGAACTCTTGGTTAACTTTCTTGAGGCCGAGGACACAAGTTCAGATGGGATCTTGGAATTGGAGCCAATGAACTCTTACAACCGTCTTCTCTTACATCGCCTTGCAGAGATATTTGGGTTTGCTCATGAATCTGTTGGTGAAGGAGAAGATCGCCATTTGATTCTGGAGAGATGTCCAGATACATCTATACCTCCAATCCTTGTCAGTGATATCCTAGGGACGTATGATGAACCTCAATCTTTGTTTGCATCACACCAAATATTAAGGAGAAAAGAAGCCTCTCCAGTTTCACAGACAAATACAACATCCATTCAACAGACACTGGAGGAAAGAAAAGCTGCTTATTTGCTTGCTCGTGAGCGGATTTTTTCTATGAATTTGGAAGATGCAAAAGAGCCTAATGAACAAAAACCACGAAGCGTGCCTGTGGTAGCCCGCCGAATGATTGCGCATGCACTAGGTCAAAGAATCAACACAAAAAATCCGAATGAGTTGGTTAATGATGGTACGAATAATAGAGGGTTCTTAGATGAATTAAATGCTCAAGATAAGAATAGTGAAAAATCTGATCTGGCAAAAGATTTTGAAGAGTCTCTATCCCTAAGAAAGAACTCAAACAGCAGAACAAGAAACACTGGTAGTTCTAATGCGGCCCCACTGAATAAAAGGAATGATCAAACACCAGTGGACAAAGGTTCGCCACCATTGTCTCAAGATGGAAAACAAGGGCAAAGTGTGAGCAAAGAGTGCATGAGAAAGGAGCACTTGGGAGCTGCGAAGAGAATGTTTGCTCATGCTTTGGGAGTACACTCGGTGAAGGATGGTTCTGTTCCTAGAAGTAGAAATGGAGAAAATACTAAGAATTAA 957 0.4159 MSMTQFAMVEELAFLVKDNLPCKHLVLTMEELLVNFLEAEDTSSDGILELEPMNSYNRLLLHRLAEIFGFAHESVGEGEDRHLILERCPDTSIPPILVSDILGTYDEPQSLFASHQILRRKEASPVSQTNTTSIQQTLEERKAAYLLARERIFSMNLEDAKEPNEQKPRSVPVVARRMIAHALGQRINTKNPNELVNDGTNNRGFLDELNAQDKNSEKSDLAKDFEESLSLRKNSNSRTRNTGSSNAAPLNKRNDQTPVDKGSPPLSQDGKQGQSVSKECMRKEHLGAAKRMFAHALGVHSVKDGSVPRSRNGENTKN* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2778 318 MobiDBLite consensus disorder prediction 234 275 - -
Mtr1g2778 318 MobiDBLite consensus disorder prediction 299 318 - -
Mtr1g2778 318 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 1 316 - -
Mtr1g2778 318 PANTHER RNA-BINDING SUPPRESSOR OF PAS KINASE PROTEIN 1 1 316 - -
Mtr1g2778 318 SMART R3H_4 10 88 IPR001374 GO:0003676
Mtr1g2778 318 SUPERFAMILY R3H domain 15 122 IPR036867 GO:0003676
Mtr1g2778 318 CDD R3H_encore_like 22 88 - -
Mtr1g2778 318 MobiDBLite consensus disorder prediction 210 233 - -
Mtr1g2778 318 Pfam R3H domain 25 86 IPR001374 GO:0003676
Mtr1g2778 318 ProSiteProfiles SUZ domain profile. 92 157 IPR024771 -
Mtr1g2778 318 ProSiteProfiles R3H domain profile. 23 89 IPR001374 GO:0003676
Mtr1g2778 318 MobiDBLite consensus disorder prediction 210 284 - -
Mtr1g2778 318 Gene3D - 2 124 IPR036867 GO:0003676
Mtr1g2778 318 Pfam SUZ domain 116 154 IPR024771 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2778 - - gmx:100801478 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2778 1 38984990 38989418 Mtr1g2778 1 38984990 38989418 ECH