Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2706 ATGAGGCTAGAACAACTCAACATGTTACTCGTACCATTTCTCTTGCTTATTCTTGTTGGTTATTTTCCTTCTAATGCAAAAGGGTCACTATTACCATTCATAGATTCTCCCAACACTCTCTTATCCGATCTCTGGTCTGATCGTTTCCCCGATCCATTTCGTGTCTTAGAACAAATCCCCTTTGGAGTTGAAAAAAACGAACCATCCATGTCACTGTCACCAGCTAGAGTAGACTGGAAGGAAACTCCAGAGGGACATGTTATAATGTTCGACGTGCCAGGGATAAGAAAAGATGAGATAAAGATAGAAGTGGAAGAGAACAGGGTGTTGAGAGTGAGTGGTGAAAGGAAGAAAGAAGAAGAGAAACAAGGTGATCATTGGCACAGAGTTGAAAGATCTTATGGAAAATTCTGGAGGCAATTTAGATTGCCAGAAAATGTTGATTTGGACTCAGTTAAGGCTAAAATGGAAAATGGTGTACTTACTTTGACACTTAATAAGTTGTCACAAGATAAGACTAAAGGTCCTAGAATGGTTAGCATTGCTGAGGAGAGTGAGCACCCATCTAAACAAGAGCTTTGA 582 0.4003 MRLEQLNMLLVPFLLLILVGYFPSNAKGSLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPFGVEKNEPSMSLSPARVDWKETPEGHVIMFDVPGIRKDEIKIEVEENRVLRVSGERKKEEEKQGDHWHRVERSYGKFWRQFRLPENVDLDSVKAKMENGVLTLTLNKLSQDKTKGPRMVSIAEESEHPSKQEL* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2706 193 ProSiteProfiles CS domain profile. 72 179 IPR007052 -
Mtr1g2706 193 SUPERFAMILY HSP20-like chaperones 67 174 IPR008978 -
Mtr1g2706 193 Gene3D - 36 181 IPR008978 -
Mtr1g2706 193 PANTHER 22.0 KDA HEAT SHOCK PROTEIN 14 188 - -
Mtr1g2706 193 Pfam Hsp20/alpha crystallin family 78 181 IPR002068 -
Mtr1g2706 193 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 66 184 IPR002068 -
Mtr1g2706 193 Coils Coil 102 122 - -
Mtr1g2706 193 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 14 188 - -
Mtr1g2706 193 MobiDBLite consensus disorder prediction 177 193 - -
Mtr1g2706 193 CDD ACD_ScHsp26_like 76 167 - -
Mtr1g2706 193 MobiDBLite consensus disorder prediction 170 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2706 Mtr-Chr1 38178528 38179528 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2706 K13993 - gmx:100500319 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2706 1 38178528 38179528 Mtr1g2706 1 38178528 38179528 ECH