Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2532 ATGGGTAAGATTCTTCGAGAAACAACGAGGCCATCCTCAAATTCATCATCATCATCTTCATCACCATCACCACCCTCAATTCCATCAACAACCTCCTCAACATCGATAACCGACACCATCAAAGGCTCACACAGGTTCAAGATAACGGGGTATTCACTCTCAAAAGGGATTGGAATTGGGAAATACATAGCATCGGAGATTTTCACCGTTGGTGGGTACGAATGGGCGATTTATTTTTACCCTGATGGGAAAAGCGTGGAGGATAATGCTACGTATGTGTCGCTTTTCATCGCGCTTGCGAGTGAAGGGACTGATGTTAGGGCGCTTTTTGAATTAACGCTTTTGGATCAGAGTGGGAAAGAGAGGCATAAGGTTCATAGTCATTTTGATAGGACGTTGGAGAGTGGACCTTATACGTTGAAATACCGTGGTAGCATGTGGGGATACAAGAGATTTTTTAAGAGAACGTCATTAGAGACTTCAGATTACCTTAAAGATAACTGTCTTAGTGTTAATTGTAGCGTCGGTGTTGTGAGGTCACACACAGAGGGCCCTAAAACATTTTCAATTCCAATATCACCTTCTACTATTGGTCACCAGTTTGGGAAGCTTCTGGAAAGTGGAAAAAGCAGTGATGTGAATTTTGAAGTGAATGGCGAAATTTTTGCGGCTCATAAATTGGTATTAGCAGCTCGATCACCTGTTTTTAGAGCTCAGCTTTTTGGTCCTATGAAAGATCAGAATACACAGTGTATAAAAGTTGAAGATATTGAGGCTCCTGTTTTCAAGGCATTGCTTCATGTTATATATTGGGACTCGCTGCCTGACATGCAAGAGCTTACTGGGATTAACTCAAAATGGGCAACTACCTTGATGGCTCAGCATCTGCTAGCAGCAGCTGATCGGTATGCCTTAGATAGACTTAGGCTGATGTGTGAAGCAAGTCTATGTGAAGATGTTGCAATAAATACCGTGGCTACAACTTTAGCTTTGGCAGAGCAGCACCATTGTTTCCAGCTGAAAGCAGTCTGTTTGAAATTCATTGCAAGGCCTGAAAATCTCAGAGCTGTGATGCAAACTGATGGTTTCGAGTACTTGAAGGAAAGTTGCCCATCTGTTTTGACTGAGCTCTTGGAGTATGTGGCTAGATTTACTGAGCATTCGGACTTCCTGTGCAAGCATAGAAACGAAGCAATACTTGATGGCAGTGATGTAAATGGAAGGCGGGTGAAGCAAAGACTATACTGTGAAAATTGA 1257 0.4256 MGKILRETTRPSSNSSSSSSSPSPPSIPSTTSSTSITDTIKGSHRFKITGYSLSKGIGIGKYIASEIFTVGGYEWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFDRTLESGPYTLKYRGSMWGYKRFFKRTSLETSDYLKDNCLSVNCSVGVVRSHTEGPKTFSIPISPSTIGHQFGKLLESGKSSDVNFEVNGEIFAAHKLVLAARSPVFRAQLFGPMKDQNTQCIKVEDIEAPVFKALLHVIYWDSLPDMQELTGINSKWATTLMAQHLLAAADRYALDRLRLMCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIARPENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFLCKHRNEAILDGSDVNGRRVKQRLYCEN* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2532 418 Pfam BTB/POZ domain 202 318 IPR000210 GO:0005515
Mtr1g2532 418 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 22 394 - -
Mtr1g2532 418 SMART BTB_4 211 320 IPR000210 GO:0005515
Mtr1g2532 418 CDD BTB_POZ_BPM_plant 197 317 - -
Mtr1g2532 418 ProSiteProfiles MATH/TRAF domain profile. 41 175 IPR002083 GO:0005515
Mtr1g2532 418 SUPERFAMILY TRAF domain-like 39 177 - -
Mtr1g2532 418 CDD MATH 42 175 IPR002083 GO:0005515
Mtr1g2532 418 SMART math_3 46 158 IPR002083 GO:0005515
Mtr1g2532 418 MobiDBLite consensus disorder prediction 7 36 - -
Mtr1g2532 418 SUPERFAMILY POZ domain 188 318 IPR011333 -
Mtr1g2532 418 ProSiteProfiles BTB domain profile. 211 270 IPR000210 GO:0005515
Mtr1g2532 418 MobiDBLite consensus disorder prediction 1 36 - -
Mtr1g2532 418 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 22 394 IPR045005 GO:0016567
Mtr1g2532 418 CDD BACK_AtBPM-like 317 380 IPR034090 -
Mtr1g2532 418 Gene3D - 320 396 - -
Mtr1g2532 418 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 39 179 IPR008974 GO:0005515
Mtr1g2532 418 Gene3D Potassium Channel Kv1.1; Chain A 187 314 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2532 Mtr-Chr1 36173014 36176411 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2532 K10523 - gmx:100799666 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2532 1 36173014 36176411 Mtr1g2532 1 36173014 36176411 ECH
Mtr7g2779 7 44477240 44480873 Mtr1g2532 1 36173014 36176411 PCT