Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2527 ATGGCACCTAGCCGGAGAAAAGGAGGCAGTAAAGCAGCGGCCGCCGCTGCCGCCGCTCGTCAATGGAAAGTTGGCGATCTAGTTCTTGCTAAAGTTAAAGGCTTCCCTGCATGGCCTGCCACGGTCAGTGAGCCGGAGAAGTGGGGTTACTCCACTGATTTGAAGAAAGTGCTTGTTTTCTTTTTTGGAACCCAACAAATTGCTTTCTGCAATCCTGCTGATGTCGAAGCATTTACTGAGGAGAAAAAACTATCTCTCGTCAAACGTCAAGGAAAGGGTGCTGACTTTGTTCGTGCTGTGAAGGAGATTGTCGATAGTTATGAGAAATTAAAGAAAGAGAGACAACTTGGTGAAGCTAACTGTGGTGGCAATGTTGCTGATGCAAATGTTTCAAAGCCATTCAACTCATACAACAAGGATCAGACAGATGCTCCTGCTTTATCACCTACTTTACCTATGAAATCTTCAAATTCCGATATGGATAGCCATGGGTTGGTATGTCCAGCGGAGGATGACTCAGCTGCTGTATTGAAAGATGAATCTCATGATAACGAGGCATCAAAGGAGCTTACTGAGAATGTTGCTTCTGTACATTCGGCTAAGCCACTTACTTACTCTTCTCGAAAGAGATCCGCTGCCGAATTATGCCCACAGGGCTTCATAACAGATAGACATATGCCAGTACGAAAGAATAGAAGTTCATCACGGGTCCAACCCTTTATGTTTCCATGTAATGACAGTGGAAAGAATGCTGGCAGCCAATTAACCAATGCAGCCCAGGGTGCGTCTGTAAGAAGGAATAAACGTCTTAGGAAATCACCTGATCTTGCTGGTTGTAATGATTTTGATTCATCTGCTTTGGTCTTGAATGGTAGCATGGAGGACAAAGACAACAGCTCTGAAATTCTCACAAATGATTCTGATGAATTTAGTTTGAATGAGGGTAGTGCAATGGATTCAAATTTTAAACACACTGAAACTAGTGAATGCCCTGAAGAAGTTGAGCTGAACAAAGGTCTTGATCTTAAAATAAAGGGTGTGGTCAATAAGAAGAAAAGAAACCCAAATAGGAAGAGGGCAACCAATGATACTTCCAAGCCAACCATTAGAGTTGAGGAGGAACTTGGTGTGCGGAATTCCAGTCAAAGTTCCCAGAACATTTGCAGAAATTCCGAAGAGAGATGCTTTGAGCAAGATGGAGATGAACACTTGCCCCTTGTGAAACGATGGAGAGTCAGAATGGGTAAATCATCTTCCACAGAGGGAGAGCTCAATAGCATTCCACATACTCCAGGGAAAAGCTGTAAGGAAGATATTAACTCACCACCGCAGATGATAGCTTCCTCCAATTGTGAGAATCGAGGCTCTGCTGATGTAGGCTCATCTGTCCTGATTGGCACCATGGATAATGTTTCTCCTTCAAAGAATTTTACACCATGTTTTGAAAATCAGGTTTGTAATACTAAGAAAGATCAAACATTCTGCTCTGTGGACTGCGAAGCTGCTTTACCTCCGTCTAAACGCCTTCACCGTGCTTTAGAAGCCATGTCAGCTAATGCTGCTGAAGAAGGTCAAGCTCATGTAGAATCATCAGCCTCAAGAATGACATCAATTGCCACATGCTGTATATCTTCTATCAAGACAAGTCCAGATGTGGCGATTAATGATCATGAAGGTGGTGGTTTAGAGTTGCAAAAGTTTGATGCCTGTGGTGGTGGTGATTCTTCTCATATAATTGTGCATAGTATATCAGCTAATTCAAATCCGATGATTTCAACCGAGAATAAATTATCTAATCAAGTGGATGAGCCGTCAACCAGGTTCCAGCCACAAGAAACTGGCAAGAATGTTCTCCAATGTGCTGCAGATCAAATTGAAGAACTTAGTGATTTTGTGGTCAGTCACACTGCTAATGTGGATTTGAAAACTCAGGTGCATGGAGAAACTTATCCAGATCTTGATTCAAAATGTAATGAAGCTGAAAGCAATCAAGATTCACCTGCCCTATCATTACCACCAAATATTGAAGCCAATATTATAACATCGAATCATTCAAATACAACATCCAATGCATCAGAGCACAATAGAATAAACCTTCATTCTGTGGCAGATGTGATGAAGAAAGAAATTATTTCCCCTAATCTTGATCCGCCTCGAAATGAGGTTGTTATTTCTGAGGGTACGAAGTGCTTGAAGCCAGCAGTAGATGATGTCAACAGAGCAAATGACATGAGCGAGTTCGTAAAAGAGGTAAAATGTGAAGGACCGGAGGAGGATTTGAATTCTGTTTCAACATCTGACTGTCTGGGTCAAAAGGCTGTTTCGGGCATTCGGTCAAGTCCATCCCTGACAGATGGGGGAGATTGCCTTCCACAAGGATCACCTCCAAACACGTCAATTTGCAATGTATCTACATCAGACAGTAGTAATATCCTTCACAATGGAAGTTGTAGTCCTGATGTACATTTGCACCAGAAACAAACTTTATCTGGTCCTGTCGATGAAAGTAAGTATGGATCTGAGGCAACTCAACAATCAAGATCAATGGGTAAGTCATCTGAAGCGGGACGTGCTGCTTTGTTGTACTTTGAAGCAATGCTTGGGACATTGAAAAGGACAAAGGAAAGTATTGGCCGAGCAACACGCATAGCTATTGACTGTGCAAAGTTTGGCATTGCAGATAAGGTCATGGAAATTCTTGCCGATAATCTGGAAACTGAATCAAGTCTGCATCGGAGGGTGGATTTGTTTTTTCTTGTTGACTCTATCGCACAGTTTTCTCGAGGTTTAAAAGGTGATGTTTGTTTAGTATATTCATCCGCTATCCAAGCAGTCCTACCTCGACTATTATCTGCTGCCGTGCCTACCGGAAATGCTGCACAGGAGAACCGTAGGCAATGTCTTAAGGTTTTAAGGCTGTGGTTGGAGAGAAAAATCCTACCAGAGCCCATGGTTCGCCATCATATCCGGGAATTGGATTTATATAGTTCAGTTTCTGCAGGTGTCTATTCACGACGATCATTAAGAACAGAGAGGGCTTTGGATGACCCTATAAGAGAAATGGAGGGTATGCATGTTGACGAATATGGAAGCAACTCAAGTTTGCAGTTACCTGGATTTTGCATGCCTCGAATGCTTAAAGATGAAGATGACAATGAAGAGAGTGATTCTGATGGAGGCAATTTTGAGGCTGTCACACCTGAGCATAATTCTGAAGTACATGAAATGACTTCTATAATTGATAAACACAGGCATATCTTGGAAGATGTTGACGGTGAGCTTGAAATGGAAGATGTGTCTCCCTCTCGTGATGTTGAAATGAATTCATTTTCCAATGTTGATAGAGGAAATGCCACACAGTTTGAGAATAATATTCATCTGCCCTCCGCCCCTCCACATCAGCTTGTGCCTCAATCTTCCGTGCCACCACCATTAGCCCCTCCACCACCACCTCCACCACCACCACCTCCTCCACCACCACTTCCTATGCCACACCTTGTTTCATCTACCTCTGATCCATGCCGTACTGTATTTAATTCTAGAGGTCATACAGAATCACAGTGCGTGAAAGACAACCCACTTCATCCTATGGATCGGCCCTTGGCTGCACCGAGGAGTAGCCAACCTATTAGTAATGCAGTGCACCATCATGCCCCAGAATATAGGGAAGCACACATTTCAGAGTCTGATCGCTCTTTCAACAGTTTCCCTGTACCGCATCCAGTAAATTATCGACATTCTGATGGTGTTACTATGCATGATAGAGGGCACTCTATAAGGCCGCCTCGCCATGTGCCGTCGAATCAGTTTTCTTTTGTTCACGGGGAACAGCATGCAAGACATCGAAGGGAGGTTCCACCACCTCCTCCTTACTCCAATAGGCAACATTTTGTGGAGAACATGGAGAGAGAACACTTCTACCATAATAATCACGAAAGATTAAAACCACCTCCATATGATTATCGAGAGAGATGGGATGTCCCCCCACCTTATCCCGGTCCTAGGTATCATGACGAAGATATGCCTTCCCCATATGGGTGTCATCCATGTGAACCACCTAGAATACCAGATCACGGGTGGAGATTTCCTCCCCGGTCAATGAATCACAGGAACTCCATGCCATTTAGACCACCCTTTGAAGATGCAATTCCAGTTACAAACAGAGGTCCAGGCTTTTGGCGGCCCAGGTATACAGACTCTTTTCGGCCTGAACTCTGGCTTTGTTTAGGAGGTGTTTATGGTCCATCATTCTATTTCTTTGATCCTAATCCAAATTACAAGATCATGTTCTTGAAGACAGACACAGAAATGGGTGCTACACAATCAGTCTTGGAAAATTCTATTCATGAATACAAAGTCAAGGATGCAAGGGGCAAAGAAGTGAACCTTGGTATCTACAGAGGGAAAGTTCTTCTTGTAGTTAATGTTGCTTCAAAATGCAACTTTGCAGATGCCAATTACACCCAGTTAACTCAGCTTTACACCAAATACAAGGAGATAGGTCTTGAGATATTGGGATTTCCATGCAATCAATTTTTAAGGAAAGAACCAGGGACTAGTCAGGAGGCACAAGATTTTGCCTGTGACAGATATAAGGCTGAGTATCCCATTTTAGGGAAGATACGTGTGAATGGACAAGATACAGCACCTGTGTATAAATACCTGAAATCACAAAAATGTGGAAGTTTGGGATCAAGAAGGATCAAGTGGAATTTTACAAAGTTTTTAGTTGATGAGGAAGGCCGTGTCATCCAACGTTATAGTCCAACCACCCAACCATTAGCCATTGAAAATGATATCAAGAAAGCACTGAGAGTGGCTAATTGA 4827 0.4299 MAPSRRKGGSKAAAAAAAARQWKVGDLVLAKVKGFPAWPATVSEPEKWGYSTDLKKVLVFFFGTQQIAFCNPADVEAFTEEKKLSLVKRQGKGADFVRAVKEIVDSYEKLKKERQLGEANCGGNVADANVSKPFNSYNKDQTDAPALSPTLPMKSSNSDMDSHGLVCPAEDDSAAVLKDESHDNEASKELTENVASVHSAKPLTYSSRKRSAAELCPQGFITDRHMPVRKNRSSSRVQPFMFPCNDSGKNAGSQLTNAAQGASVRRNKRLRKSPDLAGCNDFDSSALVLNGSMEDKDNSSEILTNDSDEFSLNEGSAMDSNFKHTETSECPEEVELNKGLDLKIKGVVNKKKRNPNRKRATNDTSKPTIRVEEELGVRNSSQSSQNICRNSEERCFEQDGDEHLPLVKRWRVRMGKSSSTEGELNSIPHTPGKSCKEDINSPPQMIASSNCENRGSADVGSSVLIGTMDNVSPSKNFTPCFENQVCNTKKDQTFCSVDCEAALPPSKRLHRALEAMSANAAEEGQAHVESSASRMTSIATCCISSIKTSPDVAINDHEGGGLELQKFDACGGGDSSHIIVHSISANSNPMISTENKLSNQVDEPSTRFQPQETGKNVLQCAADQIEELSDFVVSHTANVDLKTQVHGETYPDLDSKCNEAESNQDSPALSLPPNIEANIITSNHSNTTSNASEHNRINLHSVADVMKKEIISPNLDPPRNEVVISEGTKCLKPAVDDVNRANDMSEFVKEVKCEGPEEDLNSVSTSDCLGQKAVSGIRSSPSLTDGGDCLPQGSPPNTSICNVSTSDSSNILHNGSCSPDVHLHQKQTLSGPVDESKYGSEATQQSRSMGKSSEAGRAALLYFEAMLGTLKRTKESIGRATRIAIDCAKFGIADKVMEILADNLETESSLHRRVDLFFLVDSIAQFSRGLKGDVCLVYSSAIQAVLPRLLSAAVPTGNAAQENRRQCLKVLRLWLERKILPEPMVRHHIRELDLYSSVSAGVYSRRSLRTERALDDPIREMEGMHVDEYGSNSSLQLPGFCMPRMLKDEDDNEESDSDGGNFEAVTPEHNSEVHEMTSIIDKHRHILEDVDGELEMEDVSPSRDVEMNSFSNVDRGNATQFENNIHLPSAPPHQLVPQSSVPPPLAPPPPPPPPPPPPPPLPMPHLVSSTSDPCRTVFNSRGHTESQCVKDNPLHPMDRPLAAPRSSQPISNAVHHHAPEYREAHISESDRSFNSFPVPHPVNYRHSDGVTMHDRGHSIRPPRHVPSNQFSFVHGEQHARHRREVPPPPPYSNRQHFVENMEREHFYHNNHERLKPPPYDYRERWDVPPPYPGPRYHDEDMPSPYGCHPCEPPRIPDHGWRFPPRSMNHRNSMPFRPPFEDAIPVTNRGPGFWRPRYTDSFRPELWLCLGGVYGPSFYFFDPNPNYKIMFLKTDTEMGATQSVLENSIHEYKVKDARGKEVNLGIYRGKVLLVVNVASKCNFADANYTQLTQLYTKYKEIGLEILGFPCNQFLRKEPGTSQEAQDFACDRYKAEYPILGKIRVNGQDTAPVYKYLKSQKCGSLGSRRIKWNFTKFLVDEEGRVIQRYSPTTQPLAIENDIKKALRVAN* 1609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 1169 1187 - -
Mtr1g2527 1608 ProSiteProfiles PWWP domain profile. 24 81 IPR000313 -
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 292 312 - -
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 417 442 - -
Mtr1g2527 1608 CDD HDGF_related 20 104 IPR035496 -
Mtr1g2527 1608 CDD GSH_Peroxidase 1447 1600 IPR000889 GO:0004602|GO:0006979
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 822 852 - -
Mtr1g2527 1608 PRINTS Glutathione peroxidase family signature 1466 1483 IPR000889 GO:0004602|GO:0006979
Mtr1g2527 1608 PRINTS Glutathione peroxidase family signature 1502 1518 IPR000889 GO:0004602|GO:0006979
Mtr1g2527 1608 PRINTS Glutathione peroxidase family signature 1568 1577 IPR000889 GO:0004602|GO:0006979
Mtr1g2527 1608 Gene3D Glutaredoxin 1434 1608 - -
Mtr1g2527 1608 PANTHER PWWP DOMAIN PROTEIN 1 1396 - -
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 1123 1213 - -
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 1043 1073 - -
Mtr1g2527 1608 Pfam Glutathione peroxidase 1448 1556 IPR000889 GO:0004602|GO:0006979
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 246 263 - -
Mtr1g2527 1608 Pfam CID domain 863 984 IPR006569 -
Mtr1g2527 1608 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1396 - -
Mtr1g2527 1608 Gene3D - 861 996 IPR008942 -
Mtr1g2527 1608 Pfam PWWP domain 25 107 IPR000313 -
Mtr1g2527 1608 ProSitePatterns Glutathione peroxidases signature 2. 1505 1512 IPR029760 -
Mtr1g2527 1608 ProSiteProfiles Glutathione peroxidase profile. 1438 1608 IPR000889 GO:0004602|GO:0006979
Mtr1g2527 1608 Gene3D - 14 118 - -
Mtr1g2527 1608 ProSiteProfiles CID domain profile. 855 996 IPR006569 -
Mtr1g2527 1608 SUPERFAMILY Tudor/PWWP/MBT 20 115 - -
Mtr1g2527 1608 SMART PWWP_4 22 79 IPR000313 -
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 246 276 - -
Mtr1g2527 1608 SMART 558neu5 862 993 IPR006569 -
Mtr1g2527 1608 MobiDBLite consensus disorder prediction 1135 1166 - -
Mtr1g2527 1608 SUPERFAMILY Thioredoxin-like 1447 1604 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2527 Mtr-Chr1 36127436 36147315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2527 - - ahf:112728397 1842.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2527 1 36127436 36147315 Mtr1g2527 1 36127436 36147315 ECH
Mtr7g2789 7 44545585 44566932 Mtr1g2527 1 36127436 36147315 PCT