Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2524 ATGTTCTCCAAGACAAAAATTCAAACTTTCTTCTGCTACTACCTCAACAACAATCTCAACATTCACGTTCACACAAGACTTATATCCAGTCTCAAAGTAGTATGGCGCAAGGACCAATCACTTGACCAAGCTATAGAACAAGATAAACGCTTCAAGCAATGTGCCCGCGTCGTTAAAGAAGTTCTCAATGAACCAGGTCAAGTCATCCCTCTACGTTATCTTGAGAAACGCCGCCAAAGGATGCGTCTCAAGGTTAAAATTGATACCTTTTTGAATCAAAATCCTTTTTTATTCGATGTATACTATGATCGTATAAAACCCAAAACCGAACCTGTGAAATTTCTCCGTGTCAGCGATCATCTCCTTCAGTTTCTGCAGGAAGAGAAACGGATTTATAAGGAGAATGAGCCGTTAATTGTTTCAAAGTTGTGTAAATTGTTGATGATGTCAAAGGATAAAATTGTTAGTGCTGATAAATTGCTTCATGTGAAGAGGGAATTTGGTTTCCCTAATGATTTTTTAGTTGATTTGGTGCCAAGGTATCCGGAATATTTTAGGTTAACTGGTTTACCTGGGGAGGGAAAATCTTTTCTTGAATTGGTTAATTGGAACCCTGAGTTTGCAAAATCTGTTATTGAGAGAAGGGCTGAAGAGGAAAGTAGGGCTACTGGGATTAGGGTTAGGCCCAGTTTCAATGTAAAGCTTCCTCCAGGTTTTGTGTTGAAGAAGGAGATGAGGGAGTGGATTAGGGATTGGATGGAACTTGATTATGTTTCGCCTTATGAGGATGTTTCTCATTTGGAGCAAGCTTCTAGAGAGATGGAGAAGAGGTCTGTTGGGGTGTTCCATGAATTGCTTTCTCTTTCGTTGTATAAGAGGGTTCCGGTGCCGATTCTTGGAAAGTTTTGCGATGAATATAGGTTTTCAAATGCATTTTCAAGTGCTTTTACAAGGCATTCGGGTATATTCTATATGTCGTTGAAAGGTGGGATTGAAACTGCAATGTTGAGAGAAGCATATGATGGGGATAAGTTGATTGACATTGATCCACTGCTTCAGATAAAAGATAGATTTGCTGAGCTGCTGAAGGAGGGTTGGCGGCTAAGAGCAGAACAATTGAAGTTGAAACAAGAGAAAATTAAGCAAGATATGGAACTTGTAGCCACAAGAGTTGCTGAATAA 1182 0.3959 MFSKTKIQTFFCYYLNNNLNIHVHTRLISSLKVVWRKDQSLDQAIEQDKRFKQCARVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKIDTFLNQNPFLFDVYYDRIKPKTEPVKFLRVSDHLLQFLQEEKRIYKENEPLIVSKLCKLLMMSKDKIVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGLPGEGKSFLELVNWNPEFAKSVIERRAEEESRATGIRVRPSFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSHLEQASREMEKRSVGVFHELLSLSLYKRVPVPILGKFCDEYRFSNAFSSAFTRHSGIFYMSLKGGIETAMLREAYDGDKLIDIDPLLQIKDRFAELLKEGWRLRAEQLKLKQEKIKQDMELVATRVAE* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2524 393 Pfam Plant organelle RNA recognition domain 37 366 IPR021099 GO:0003723
Mtr1g2524 393 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 388 IPR045040 GO:0003723
Mtr1g2524 393 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 17 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2524 Mtr-Chr1 36108865 36111828 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2524 - - lang:109336290 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2524 1 36108865 36111828 Mtr1g2524 1 36108865 36111828 ECH
Mtr7g3363 7 50777595 50780779 Mtr1g2524 1 36108865 36111828 PCT