Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2493 ATGAGAGATGATAACTTGAAGAAAAGCAAGCTTTCATGGCCCAAAACTTTGGTCAAGAAATGGTTTAATATCAAGAGTAAAAATGAAGACTTTCAAGCGGATGATGATGTTCTTTATGGAGGTGTTGATGAAGAGTGGAGGAACAACTGTTCAAAGAGGGAAGAATGCACTATCAAGAAAAGCAAAATAGAAAGAACAAAGAGAAGACATTCAGAAAGATCGCGGCGATGTAAGGTTGATCATGATGCAGCTCAGGTTACAGATATGAATCATTATAGAATCTTTTCGGCGACTTGGAATGTAGCTGGACGATCTCCTCCGAGTTATTTAAATCTGGAAGATTGGCTTCATACATCTCCTCCTGCTGATATTTATGTTCTAGGGTTTCAAGAAATTGTACCTCTCAATGCTGGAAATGTTTTGGGGACAGAAGACAATGCTCCTGCTAGAAAATGGCTAGCTCTTATTAGAAAGACACTAAACAGTCTTCCCGGAACAAGTGGTGAATGCCACACTAATTCACCACTTCCTGATCCTGTTGTTGAGTTAGATTCTGATTTTGAGGGATCAATGAGGCAGAAGGCAACCTCTTTCTTCCATCGCAGGTCGTTCCAATCTTTGAGTCATAGTATGAGAATGGACAATGACATGGTGGTGCCACAAGCATGCCTTGATCGCCGTTTCAGCGTCTGCGATAGAATGATATTTGGTCATAGCACAGGTGACTATGAACAGAATTATAGATGGGGTTCCTCGGATGACGAAAACGGGGACTCTCCAGTTGTAGCGCAATATTCACCGATGTTGTATAGAGGGTCTGTCTCTATGGAGGACAGAGATAGACAGACAGAGAACTCGAGATATTGTTTGGTTGCTAGTAAGCAAATGGTTGGGATATTTCTAACAGTTTGGGTGAAAAGCAATATTAGAGATGATGTTCGCAATATGAAAGTGTCTTGCGTTGGCAGAGGTTTGATGGGATACCTCGGAAACAAGGGTTCAATATCAATTAGCATGTCTTTGCACAAAACGAGCTTTTGCTTCATATGCAGTCATTTGACTTCCGGACAAAAGGAGGGGGATGAGTTAAGGAGAAACTCAGATGTAATGGAGATTCTCAGAAAGACAAGGTTTCCCCGGGTTAACGGCATTGGCGATGAGAGCTCACCTCAGACTATTCTGGACCATGATCGAATAATTTGGCTGGGAGATTTAAATTATCGGATTGCCCTTACTTACCGTGCAGCAAAAGCTCTTGTTGAGATGCATAATTGGAAGGTATTGTTAGAGAATGACCAGTTGCATATTGAGCGGGAACAAGGTCGTGTCTTTGAAGGATGGAATGAGGGGCAAATATACTTCCCTCCCACATATAAGTATTCAAACAATTCGGACAGATACACAGGCGATGATATACACTCAAAACAAAAGAGGAGAACTCCAGCATGGTGTGATCGGATCTTATGGCATGGAAGAGGCCTCCGCCAATTATCTTATGTTCGTGGCGAGTCAAGATTCTCTGATCATAGACCAGTTTGCAGCGTGTTCCTGGCAGAAGTCGAGTCTGTTAGCCGTAACCGAATCAAAAAATGCTCTAGTTGCTCAAGTTCAAGGGTCGAAGTAGAAGAGTTGTTGCCTCATTCAAATGGCTACAACTATACCGATTTGACTTTCTATTGA 1680 0.4214 MRDDNLKKSKLSWPKTLVKKWFNIKSKNEDFQADDDVLYGGVDEEWRNNCSKREECTIKKSKIERTKRRHSERSRRCKVDHDAAQVTDMNHYRIFSATWNVAGRSPPSYLNLEDWLHTSPPADIYVLGFQEIVPLNAGNVLGTEDNAPARKWLALIRKTLNSLPGTSGECHTNSPLPDPVVELDSDFEGSMRQKATSFFHRRSFQSLSHSMRMDNDMVVPQACLDRRFSVCDRMIFGHSTGDYEQNYRWGSSDDENGDSPVVAQYSPMLYRGSVSMEDRDRQTENSRYCLVASKQMVGIFLTVWVKSNIRDDVRNMKVSCVGRGLMGYLGNKGSISISMSLHKTSFCFICSHLTSGQKEGDELRRNSDVMEILRKTRFPRVNGIGDESSPQTILDHDRIIWLGDLNYRIALTYRAAKALVEMHNWKVLLENDQLHIEREQGRVFEGWNEGQIYFPPTYKYSNNSDRYTGDDIHSKQKRRTPAWCDRILWHGRGLRQLSYVRGESRFSDHRPVCSVFLAEVESVSRNRIKKCSSCSSSRVEVEELLPHSNGYNYTDLTFY* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2493 559 Pfam Endonuclease/Exonuclease/phosphatase family 97 509 IPR005135 GO:0003824
Mtr1g2493 559 Gene3D Endonuclease/exonuclease/phosphatase 71 215 IPR036691 -
Mtr1g2493 559 Gene3D Endonuclease/exonuclease/phosphatase 229 544 IPR036691 -
Mtr1g2493 559 PANTHER PHOSPHORIC MONOESTER HYDROLASE-RELATED 3 555 - -
Mtr1g2493 559 SUPERFAMILY DNase I-like 83 533 IPR036691 -
Mtr1g2493 559 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 3 555 IPR045849 GO:0004445|GO:0046855
Mtr1g2493 559 SMART i5p_5 213 524 IPR000300 GO:0016791|GO:0046856
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2493 Mtr-Chr1 35745325 35750210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2493 284 489 Acyl Lipid Metabolism Gene Families AT1G65580 31.760 4.59e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2493 - - gmx:100788764 986.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2493 1 35745325 35750210 Mtr1g2493 1 35745325 35750210 ECH
Mtr7g2826 7 44975788 44980362 Mtr1g2493 1 35745325 35750210 PCT