Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2489 ATGGCGACGGCGACTCGGTCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCTAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGACATGGATGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCGGAAATGTACTATAAAAAGCGCCCAGAGCTGATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGCGCATTGGCTGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCTCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCTGTGATGATTACAGACGATTTACCAATGGTTACATCCATGGAGACTGAGCCACGTACACCAGAAACACGCCATCCTTCACGTACATTTCTGGACTCGGATGAATCAGAAAAAGATGCTCATTTTATCAAACGAAATGGAGCAGATAGTGAAGAACTTCATTCTGCTTTGAACAAGACGGGTTTAAGACAGCTCAATGATCTCCTCATCCCTCGAGAACATGCAAAGTTTGAAGGGCATGCTCGAAGGGGGCTCAATTTTTTAGAGACGCAGGAGGAAAGCAGTGAGCTAAACAATGGAGGCCGTGGCACTAAGGCTCATGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCCGAAGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTGGAAGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTCTCAAAGAGTCGATGAACGAGCAAGCAAAGCAGAAGCTGAAGTTCAAGACTTGAAGGAAGCGGTAATCAAATTACAGGCGGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACCGATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAGTTTAACGAACGTGCTACTAGAGCTGAAACTGAAGTTGACTCCTTGAAGCAGGACCTTCTAAGAGTAGAAGCTGAAAAGGAAGTTGCCCTTCTTCAATATAAACAATGCCTGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAATGTTAGAAGGATTAATCAGCAAGCTAATTTAGCTGAAAACGAAATTGAAGCTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTCCGATATCAGCAATGCTTGGAGATAATTTCCAGTCTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGGGTAGGTTAAATTCTAAGATAGACGATGAGGTTGAAAAGTTACATAGTTCCGAACAGAAGTGTCTTCTTTTGGAAACATCGAATCACGCTCTACAGTCTGAATTACAGTCTTTGGCACACAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGAAGGAATTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAGCATTTGCATTCTCAATCTCAGGAAGACCTTAGAGCTCTTGCTGCTGACTTTCACGGTAAATTGGAAATACTAGGGAATGTTGAATCACGTAAGCAGTCTCTAGAGGATGAAGTGCACAGAGTCAATGAGGAAAACAAAATTCTAAATGAGCTCAAGATTTCTTCATCTTTGTCTATACAAACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATATGAATAAAAAACATGAAGCTATGATTGACGAGGTCAGGTCAGCTGATTTAGATCCACAGTGCTTTGGCTCATCGGTGAAACAATTGCAAGACGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGAAAAAGATGAGAAACTGGCTCTTTTGGTAAAATTGGAAACCATGGAGAAGCTTTTGGAGAAGAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAAGTAAATGTGTTGGAAGGAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAATTACAAGCCACCACTGAAAAGCTTGAGAAGCTTTCGGAAAATAACAACCTTTTGGAAAATTCACTATTTGACGTCAGTACCGAACTTGATGTATTAAGAGGGAAGTCAAAGATCTTAGAAGACGCGTGCCAGTTACTTGACCATGAGAAGTCCAGTATCTCTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACTCAGCAAATTCTGAAAGATCTTGAAAAACAACACAGTGAATTGGAACTAATGCATTTGGAACTAAAAGGAGAAAGGGAGTCATCACTTAAAAAGGTAGAAGAGCTACTGGTTTCCCTGTATTCCCAAAGGGAAGAGCATTGCAGAGTTTTGAAGTTGAATGAAGATGAAGTGGCCAACAAGGAATTACAAATCGATATTCTGAAAGAAGATGCAAAGTGCCGGAAACAAGAATATGAGGAGGAACTGGATAGATCTCTAAACGCTCAGATTGAAATTTTCATCTTGCAGAAGTGTATCCAAGATTTGGAGAAAAGGAACTTTTCCCTCCTAGTTGAGTGCCAGAGACTTTTGGAGGCGTCCAAAATGTCTGACAAAATTATTTCTAATTTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCTGATAAAATTAAAATACTAAGGGTTGGACTGCATCAGGTGTTGAAGACTCTTGACATTAACGGTGATAATTTCTTTGAAGATATGCTTGACGAAGACCAAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAGAAGTCTTTTGACGCGATTTTCAAGGAAAGCCACCACTTGACCGTTGAGAATTCGGTTCTGATTACATTTCTTGAGCAGTTGAAAATGACTGTAGAAAATCTTGTGATAGAAAAAGGAGCACTTGATGAGGAGTCCAAGATACAGTCTAAGCAGTTCACGGCATTGCAAATTGAGTTCCAAAAGGCATTGGAAAAGAATCAGGAGTTGAAGTTGGCCATAAGCAAAGGAGAAGAGAAAATGGAAGGTATGACAGCTGAAATAGTTAATCTACGCGAAGAGCTATCAAACTTTGAAAAGATCCACAGAAACTTACATGAAAAAAGTTGCACGATAATTGAAGAGAAAAAATCCTTGCTGGGAAGATTTAAAGATCTGAGTGAGGAGAAGGGTAACTTGGAAGAAGAACTTTGTGTCCTGTCCCACGAGACATTCGTTCAATCTAATATTTCTGCGATTTACGAGAATATCATCTCTGAAAAACTCCAGGAACTTAAACAGCTTGGTCAAGAACTTGATAAGCTCGGTTCAGAAAATAATAACCTTGAGGAGAGATTGAAGATAATGGCACACAAATTAGAAAATGAAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTAAAGTCAAATGTTGAATTGAATTTAGTTGAATCTGTCAATGATCAATTGACTTGTCAGATTAGGAATGAAAGGGAAATGCTGTGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACCGAGAAAACAGAATTGCAAAGAACGGCGGAAGATCTGAAGATTAGATATGATGATGCCAAGGGGAAACTTGAAGAGCAAGCTAATCGAATTTCCCACTTGTCCTCGGACAAGGACCGTCAAAATGAAGAGCTTGGATGCCTCAGTGAAGTGAACCAGAAATTGGAGTCTGAAATGAAGTGCCTACACCAAGAACTTGAAGAAATTAAGCTAAGGGAAAAGAAGCTAAGTTATGAAGTACACGAAGGAATAAATGAGATTGAACAATGGGAAACTCAAGCTGCAGTACTCTTTGCCGAACTGCAGGTTTCTGCTGTCAATGAAACACTACTTCAAGGGAAGGCTTGTGAGCTAGCTGATACATGTGAGCATCTTGAGAGCATAAACTACTCGAAAGACATGGAAAGAGAACAGCTGAAAGAATTAGTTAGCAAGTTGGAAGGTGAAAATGGGAAAATGTGTGATCAATTAGCTGCTTATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTAACATCTCTGGAGGTGCAGACTCTAGGGCATCCAAAACATCATGACTATGAAAAACCTGAGGTTAAAAATTTGGTGAATCACCAATACATTGAAAATGGTCAACAAATAGATGAATATCAATCTGTTACGGCACCAGATCCTCTCCTCGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAATTTTAACGCAAGTTCCAAAGCCAATGTTGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAAATGGGGAGTTTAAGGCCAGATAATCCTGTAACTGAGATTGAAGTACTTCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATATGGAGTAAGCAGGGGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACATCTGATAAGACACCGAAGATGGCAGCAGAACCAGCAGAAGATCATCATCAAAGAAGAGCATCCAAGGAAACATACAACAAACATCCTTCAGGAGATTCCTTGGTGGAAAAGGAGTTGGGGGTGGACAAGTTAGAGATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGGCAACAAGAGTAGAGTTTTGGAAAGACTTGATTCTGATTCACAGAAGTTAACGAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTTGAAACTATTGAGAAGAGTACAAAGGGAAAAAGTGCCGAGTATGATACCGTTAAAGAGCAGCTTGAAGCGTCTCAGGAGACTGTAATGAAGTTGTTCGATGCCAACCGCAAGCTGGTGAAGAATGTAGAAGAAGGTGCACTGTCTTCAGCTGGGAGAGCTTCATCAGAATCAGATGAGATTGGAAGTGTCAGCAGGAGGAGATTTTCGGAACAAGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAGGTTCAAAGACTCCAGTTTCTTCTTTTGAAACTCAATGATGCAAAAGAAAGCAAAGAGAAAACCAAAATGGCTGATCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGGGACAAAAACCAACAACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGACCACCCACTAAGGGAGATTGA 5391 0.4027 MATATRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPVMITDDLPMVTSMETEPRTPETRHPSRTFLDSDESEKDAHFIKRNGADSEELHSALNKTGLRQLNDLLIPREHAKFEGHARRGLNFLETQEESSELNNGGRGTKAHVLSESERVTKAEAEISALKKALAKLEDEKEAGLLQYQQSLEKLSNLELEVSSAQENSQRVDERASKAEAEVQDLKEAVIKLQAEREATLLQYQECLEKITDLEKNISFAQKDAGEFNERATRAETEVDSLKQDLLRVEAEKEVALLQYKQCLETLSKLEERLKESEENVRRINQQANLAENEIEALKLEVTKLNEEKEDAALRYQQCLEIISSLEHKLSCAEEEVGRLNSKIDDEVEKLHSSEQKCLLLETSNHALQSELQSLAHKMGSQSEELNEKQKELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEDLRALAADFHGKLEILGNVESRKQSLEDEVHRVNEENKILNELKISSSLSIQTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHEAMIDEVRSADLDPQCFGSSVKQLQDENSKLKETCEAEKDEKLALLVKLETMEKLLEKNSVLENSISDLNAELDSVRGKVNVLEGTCQSLLVEKSTLAAEKATLFSQLQATTEKLEKLSENNNLLENSLFDVSTELDVLRGKSKILEDACQLLDHEKSSISSEKEALVSELNTTQQILKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVLKLNEDEVANKELQIDILKEDAKCRKQEYEEELDRSLNAQIEIFILQKCIQDLEKRNFSLLVECQRLLEASKMSDKIISNLETENIQKQDDVDSLSDKIKILRVGLHQVLKTLDINGDNFFEDMLDEDQTLLNHIHGKLKERKKSFDAIFKESHHLTVENSVLITFLEQLKMTVENLVIEKGALDEESKIQSKQFTALQIEFQKALEKNQELKLAISKGEEKMEGMTAEIVNLREELSNFEKIHRNLHEKSCTIIEEKKSLLGRFKDLSEEKGNLEEELCVLSHETFVQSNISAIYENIISEKLQELKQLGQELDKLGSENNNLEERLKIMAHKLENEEMENSHLKELFVKSNVELNLVESVNDQLTCQIRNEREMLCQKEKVLSEAAKTFHALHTEKTELQRTAEDLKIRYDDAKGKLEEQANRISHLSSDKDRQNEELGCLSEVNQKLESEMKCLHQELEEIKLREKKLSYEVHEGINEIEQWETQAAVLFAELQVSAVNETLLQGKACELADTCEHLESINYSKDMEREQLKELVSKLEGENGKMCDQLAAYVPAISALNDCVTSLEVQTLGHPKHHDYEKPEVKNLVNHQYIENGQQIDEYQSVTAPDPLLDFQDLQRRINEISMAVKNFNASSKANVEMREIQEAKEIEQKMGSLRPDNPVTEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTPKMAAEPAEDHHQRRASKETYNKHPSGDSLVEKELGVDKLEISRRMSRPREEGNKSRVLERLDSDSQKLTNLQITIQDLMKKVETIEKSTKGKSAEYDTVKEQLEASQETVMKLFDANRKLVKNVEEGALSSAGRASSESDEIGSVSRRRFSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDAKESKEKTKMADQSRRVRLRDYLYGGTKTNNQKKKKTPFCACVRPPTKGD* 1797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2489 1796 Coils Coil 547 574 - -
Mtr1g2489 1796 Coils Coil 855 893 - -
Mtr1g2489 1796 MobiDBLite consensus disorder prediction 128 147 - -
Mtr1g2489 1796 MobiDBLite consensus disorder prediction 1564 1600 - -
Mtr1g2489 1796 Coils Coil 652 672 - -
Mtr1g2489 1796 Coils Coil 1627 1654 - -
Mtr1g2489 1796 SUPERFAMILY Tropomyosin 392 638 - -
Mtr1g2489 1796 Coils Coil 1021 1041 - -
Mtr1g2489 1796 MobiDBLite consensus disorder prediction 126 147 - -
Mtr1g2489 1796 PANTHER KINASE INTERACTING (KIP1-LIKE) FAMILY PROTEIN 4 1796 - -
Mtr1g2489 1796 SUPERFAMILY Tropomyosin 218 415 - -
Mtr1g2489 1796 Coils Coil 1112 1132 - -
Mtr1g2489 1796 Coils Coil 1154 1195 - -
Mtr1g2489 1796 Gene3D - 303 476 - -
Mtr1g2489 1796 Coils Coil 683 717 - -
Mtr1g2489 1796 Coils Coil 1056 1104 - -
Mtr1g2489 1796 Coils Coil 795 829 - -
Mtr1g2489 1796 MobiDBLite consensus disorder prediction 1567 1600 - -
Mtr1g2489 1796 Coils Coil 1252 1321 - -
Mtr1g2489 1796 Coils Coil 477 497 - -
Mtr1g2489 1796 MobiDBLite consensus disorder prediction 1694 1722 - -
Mtr1g2489 1796 MobiDBLite consensus disorder prediction 1707 1721 - -
Mtr1g2489 1796 Coils Coil 225 455 - -
Mtr1g2489 1796 Coils Coil 932 952 - -
Mtr1g2489 1796 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 15 95 IPR011684 GO:0003779
Mtr1g2489 1796 Coils Coil 732 766 - -
Mtr1g2489 1796 Pfam KIP1-like protein 16 89 IPR011684 GO:0003779
Mtr1g2489 1796 PANTHER PROTEIN NETWORKED 4A 4 1796 - -
Mtr1g2489 1796 Coils Coil 582 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2489 Mtr-Chr1 35669508 35676959 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2489 - - lang:109335385 2234.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2489 1 35669508 35676959 Mtr1g2489 1 35669508 35676959 ECH
Mtr7g2832 7 45058655 45066280 Mtr1g2489 1 35669508 35676959 PCT