Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2485 ATGGAACCAAAGTTAACTATCCATTGTCACAGAAATGAGTTCCTTCCAACAACAAACAATGGCAATACACGTTTGCCAGAGAGTCCTAGAATACCAATGGAGTTTCTTTCAAGATCATGGAGTGCCTCAGCTTTTGAGGTCTCTAAAGCATTGTCACCTCAACCACCACCCCCTCCTCCTCCTTCTAAGGCTTCTACTAACTCTATTCCTGAAGAAACTATTACTACTCTTTCTCAAGAATTCTCAAACATGTGTGGAAATCAATTCTCTTTTGCTACTTCAACTACTTCACAGCTTGTCCTTGAACGTATCATGTCACAATCCGCAAGAGAGGAAGTGTCTCCATTAACATCAGGTAGATTGTCTCATAGCAGTGAACCATTAAATGGTGGTTCTTTAACAGGAACAGATAGTCCACCAATTTCTCCTTCTGATGAGTTTGACGATGTTGTTAAGTTTTTTCGTGCAAACAATTCCATACACCCTTTATTCAATGGTACAAGAGCAATGAGTAGTGGAATTGGCAATGCAACTCCTTGTTCAGGACCTAAAACAGTAGGAAGATGGTTGAAAGAAAGAAGAGAAAAAAAGAAAGAAGAAAACAGAAGCCATAATGCTCAACTTCATGCTGCTATTTCTGTAGCTGCTGTTGCTTCTGCAGTTGCAGCTATCACTGCAGCAACAGCAGCATCAACTACACCTAATAAGGATGAGAAAATGGCTAAGACTGATATGGCTGTGGCTTCTGCAGCAACACTTATTGCTGCTCAATGTGTTGAAGCTGCTGAAGCAATGGGAGCTGAGAGAGAACACCTTGCTTCTGTTGTTAGTTCTGCTGTTAATGTCAAATCTCATGATGATATCACTACTCTAACTGCTGCAGCTGCCACAGCTCTAAGGGGGGCAGCAACATTGAAAGCAAGAGCATTGAAAGAGATGTGGAATATTAGTACTGCAGTGACACCACTTGAGAAAAGCATAGGAATTGGAATATGTGGTGGTAAAGGTAATAACAACAGTAGTTCTAGCACTAGTGAAAGTGGAGGAGAGGTTATCAATGCAGATAATTTTCTGAGTACTTGCAGCCAAGAACTTCTTGCTAGAGGAACTGAATTACTCAAACGAACTCGCAAAGGTGATCTTCACTGGAAAATAGTTTCTGTTTATATACATCGAACCGGCCAGGTGATGCTGAAAATGAAAAGCAGACATGTTGCAGGAACCATTACAAAAAAGAAAAAGAATATTGTGTTGGATGTGTGCACAAATTTACCAGCTTGGCCAGGAAGGCATCTATTAGAGGATGGTGAAAAAAGAAGGTATTTTGGATTGAAGACAGAATCAAGAGGTTTAGTTGAGTTTGAATGTAGAAATCAAAGAGAATATGAATTGTGGACACAAGGTGTTTCAAGACTTCTTTCCATTGTTTCACACAGGAAAAACAGAAATGGAATCTAA 1458 0.3999 MEPKLTIHCHRNEFLPTTNNGNTRLPESPRIPMEFLSRSWSASAFEVSKALSPQPPPPPPPSKASTNSIPEETITTLSQEFSNMCGNQFSFATSTTSQLVLERIMSQSAREEVSPLTSGRLSHSSEPLNGGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGTRAMSSGIGNATPCSGPKTVGRWLKERREKKKEENRSHNAQLHAAISVAAVASAVAAITAATAASTTPNKDEKMAKTDMAVASAATLIAAQCVEAAEAMGAEREHLASVVSSAVNVKSHDDITTLTAAAATALRGAATLKARALKEMWNISTAVTPLEKSIGIGICGGKGNNNSSSSTSESGGEVINADNFLSTCSQELLARGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSRHVAGTITKKKKNIVLDVCTNLPAWPGRHLLEDGEKRRYFGLKTESRGLVEFECRNQREYELWTQGVSRLLSIVSHRKNRNGI* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2485 485 MobiDBLite consensus disorder prediction 111 141 - -
Mtr1g2485 485 Pfam Plant pleckstrin homology-like region 371 476 IPR013666 -
Mtr1g2485 485 MobiDBLite consensus disorder prediction 51 65 - -
Mtr1g2485 485 PANTHER AUXIN CANALIZATION PROTEIN 1 484 - -
Mtr1g2485 485 MobiDBLite consensus disorder prediction 47 68 - -
Mtr1g2485 485 Pfam Auxin canalisation 26 325 IPR008546 -
Mtr1g2485 485 PANTHER EXPRESSED PROTEIN 1 484 IPR040269 -
Mtr1g2485 485 MobiDBLite consensus disorder prediction 111 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2485 Mtr-Chr1 35623738 35627275 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2485 - - gmx:100782024 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2485 1 35623738 35627275 Mtr1g2485 1 35623738 35627275 ECH
Mtr7g2836 7 45116200 45118735 Mtr1g2485 1 35623738 35627275 PCT