Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2468 ATGAAAATCAATAACTACTCACAAATGGATTCAAAGATGATTGCACATAACATGAGCCTAACACCAACTTTAGCTCAGTGGAAGAAGCTAAGACTTAAACCAAAACACACTTTTGTAGTTGGAGTTCTTGCAAGGCCTACAGATGATATTTCAGAAGAAACATTAAGAAAAACTAATGTATACAAAGATAATTGGTTTGACAAATTAGCTATAAACCATTTATCAAAAAGTGTTCAAGCAGCAACAGGAATCAGTAACAATAAGAGTGGTTTTGATAGCCTTGTTGAGGCAGCTACCGTGGCTTCACAGAAATTTAATACTACTCAACAGCAAGGAATTATTCTAGATGCACTTGATAGAGCTTTTCCAAAGCCAATACTTTCAGTGATAAGGAGAGTAATGCCACCATCTAAATTAGCAAGGGAATATTTTGCCGTCTTCACCACTATATTCTTTGCTTGGTTACTCGGTCCCTCCGAGGTAAGAGAGTCAGAGATCAACGGAAGAAGAGAAAAAAATATTGTCCACATTAAAAAATGCAGATTCTTAGAAGAAACAAATTGTGTTGGGATGTGTATTAATCTCTGCAAAATGCCATCTCAATTGTTCATAAAGGACTCGTTTGGTATGCCAGTCAACATGGTCCCAAATTTTGATGACATGAGTTGTGAGATGATATTCGGCCAGGAACCCCCAGCATCAACTGATGATCCAGCACTCAAGCAACCCTGCTATAAACTTTGCAAGGCTAAGAAAAACCATGCAACTCAGTGTCTTAGTTAA 783 0.3742 MKINNYSQMDSKMIAHNMSLTPTLAQWKKLRLKPKHTFVVGVLARPTDDISEETLRKTNVYKDNWFDKLAINHLSKSVQAATGISNNKSGFDSLVEAATVASQKFNTTQQQGIILDALDRAFPKPILSVIRRVMPPSKLAREYFAVFTTIFFAWLLGPSEVRESEINGRREKNIVHIKKCRFLEETNCVGMCINLCKMPSQLFIKDSFGMPVNMVPNFDDMSCEMIFGQEPPASTDDPALKQPCYKLCKAKKNHATQCLS* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2468 260 Pfam Beta-carotene isomerase D27-like, C-terminal 154 234 IPR025114 GO:0005506
Mtr1g2468 260 PANTHER BETA-CAROTENE ISOMERASE D27, CHLOROPLASTIC 14 256 - -
Mtr1g2468 260 PANTHER BETA-CAROTENE ISOMERASE D27 14 256 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2468 Mtr-Chr1 35373488 35382820 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2468 K17911 - gmx:100782912 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2468 1 35373488 35382820 Mtr1g2468 1 35373488 35382820 ECH
Mtr7g2849 7 45315562 45321873 Mtr1g2468 1 35373488 35382820 PCT