Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2454 ATGAAGCTTTTTCGTCAACGCCAAAGGATCCTCATTCTCTCTCTTCTCTTTCTTTCCCTCGTTGCTCCTCTCATTTTCTTAGGGAGAAGAGAGTTCCTTGAAGATTTGTATCGTGTTACATACAGGACGGATAGTTTGAAGTTAAATGCTGCAGAACAGATTCAACAAGATGCTGAAGAATTAGAAGAGCCTAATCAAGTTGTTTATAAACAAAAAGACGTTTCAACAATTAGTTATGGTTCAGAAAAGAATAATGATGCTGAGGAACCTAGAATTGCAGCTGTTGAAAGAAATGGATTCAACCATGATGAAAGACAAGACAAGGATGCTCAGGGAAAAGATGTATCCTCCATAGACGAAGATACAAATGTAAATGATGTTGTGCATGGAACATCGAAGGAGAATATTAAAGTGACCAATAGGACATCAGGTCGAATAGCAGACCATCATCATATTTTAAACTCTAATTCTCGTGAAGTGAAAAATCAGAAGGTTCAAGAGATTAAGGATAAAATTTTAATGGCTAAAGCATACTTGAAGTTTGCACCACCAAGCACCAACTCACACTTGAAGGAGCTGGAGCTGCAAATGAAAGAGATGGAGCGAGCAGTAGAAGGAGCCACCCGGGATTCAGATTTGTCAAGGAGTGTTTTGCAGGCAATGAGACACATGGAGGCCTCACTGTCTACTGTCAGCCGTTCTGTCTCAGACTGTTCTGTGGCTTCTAAGCTTCAAGCAATGAAGCGCAAAACTGAAGAGCAAGTTCGTTTTCAGAGAAGTCGAGCAACATATCTTGTTAATCTTGCTGTAAGGACTGCCCAAAAAAATTTTCACTGCCTTTCTATGCGGCTGACTGCTGAATATTTTGCCCTAAGACCTGAGGAAAGAAAGCTTCCAAATGAAAATAAGATTCATCATCCAGAACTTTATCATTATGTTGTCTTCTCTGACAATGTTCTGGCATGTGCAGTTGTTGTTAACTCTACTGTCTCTACTGCCAAGGAACCAGGGAAACTTGTTTTCCATATAGTCACTGATTCTCTCAACTTGCCAGCGATCTCGATGTGGTTCTTGATAAACTCTCCTGGCAATGCCACAGTCCATATACAGAGCATAGACAACATTGAATGGTTGTCGAAATACAATACCTTCGGTAAAAATGGTAACAACGATCCAAGATACACTTCTGAATTGATCTACTTGCTTTTCTACCTGCCTGACATTTTCCCTGCCCTAAATAAGATTGTGATCTTTGATCATGATGTGGTGGTTCAACAAGATCTCAGTGGACTATGGAATGTCAATATGAATGGAAATGTTAATGGAGCTGTTGGAACTTGTCAGGAAGGCAAAACCCCATTTCATAGGATTAATGGGTTCATAAACTTCTCAGATCCACTAATTGGAGAGAGTTTTGATGCCAATTCTTGCACATGGGCATTTGGAATGAATTTGTTTGATTTGCAACAATGGAGGAGACATAATTTAACGGCTGTCTATCACAAATATTCACAAATGGGTTCTGAGAAGCCATTGTGGAATTGGAACGTTGCACGTATGCCTTTAGGTTGGCTCACCTTCTATAACAAGACAGAGGTGTTGGACAGACTATGGCACATTCTTGGCCTTGGTCATAACTCAGGAGTTGATCGAAATGACATTGAGCAGGCTGCTGTTGTACACTATGACGGGATTAGGAAGCCATGGTTAGATATTGCAATGGGAAGATATAAAGGTTATTGGACCAAATTTTTGAATTTTGACCACCCTTTTCTACAACAGTGCAATCTCCAGCCATAG 1800 0.4022 MKLFRQRQRILILSLLFLSLVAPLIFLGRREFLEDLYRVTYRTDSLKLNAAEQIQQDAEELEEPNQVVYKQKDVSTISYGSEKNNDAEEPRIAAVERNGFNHDERQDKDAQGKDVSSIDEDTNVNDVVHGTSKENIKVTNRTSGRIADHHHILNSNSREVKNQKVQEIKDKILMAKAYLKFAPPSTNSHLKELELQMKEMERAVEGATRDSDLSRSVLQAMRHMEASLSTVSRSVSDCSVASKLQAMKRKTEEQVRFQRSRATYLVNLAVRTAQKNFHCLSMRLTAEYFALRPEERKLPNENKIHHPELYHYVVFSDNVLACAVVVNSTVSTAKEPGKLVFHIVTDSLNLPAISMWFLINSPGNATVHIQSIDNIEWLSKYNTFGKNGNNDPRYTSELIYLLFYLPDIFPALNKIVIFDHDVVVQQDLSGLWNVNMNGNVNGAVGTCQEGKTPFHRINGFINFSDPLIGESFDANSCTWAFGMNLFDLQQWRRHNLTAVYHKYSQMGSEKPLWNWNVARMPLGWLTFYNKTEVLDRLWHILGLGHNSGVDRNDIEQAAVVHYDGIRKPWLDIAMGRYKGYWTKFLNFDHPFLQQCNLQP* 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2454 599 Coils Coil 190 210 - -
Mtr1g2454 599 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 312 589 IPR029044 -
Mtr1g2454 599 MobiDBLite consensus disorder prediction 97 120 - -
Mtr1g2454 599 MobiDBLite consensus disorder prediction 97 131 - -
Mtr1g2454 599 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 598 IPR029993 GO:0047262
Mtr1g2454 599 SUPERFAMILY Nucleotide-diphospho-sugar transferases 310 597 IPR029044 -
Mtr1g2454 599 Pfam Glycosyl transferase family 8 279 573 IPR002495 GO:0016757
Mtr1g2454 599 PANTHER HEXOSYLTRANSFERASE 1 598 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2454 Mtr-Chr1 35210387 35217156 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2454 1 598 Glycosyltransferase AT1G06780 45.933 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2454 K13648 - gmx:100819255 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2454 1 35210387 35217156 Mtr1g2454 1 35210387 35217156 ECH
Mtr7g2862 7 45427805 45434356 Mtr1g2454 1 35210387 35217156 PCT