Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2443 ATGCAGAAAGATTATAATGGCAAGCCTAGTGTCACACAGATCGTGGTGGCCTCTTCCATTGGGTTGATAATTGCTGCAGCAATGCATTATCGCCTAAAAAAGTTAAGAGGTCGAAAGATCATCCCACTTGTGAGATTATCAAAGACTGGCCAAAGTCCTAAGCTTGAGAGATTCTCTCATTATGTAGCTAGGCAAATGGGGTTCAAAGATAGGAGGAACTGTCCTAATTTATGTAAATTGGCTTCTGAATACATAAGAAAATCTGAGGGATGTGAAGATGATATCTATGCTTTTTTTGAAAATGAACCAAATGTGGATTCACTTTTTGTCAAGCTTGTGGAAGAGTTTGAGAGATGCATTCTTAGTTACTTTGCATTCCATTGGAGCCTTGGTGATTTATTGATAAGTCAGGTCTTGAGCTCTGACACTGAGCCAAAAAAGAAATTCAAGCACATGGTTATGGCAGCAACTAGGGATCAAAGGGTTGAAAGGGTAACAAAGAATTTGAAGGTGGCAAGGGTTTTCAATACACTAGTAGAAGAGATGAAAGCAATGGGACTTGTATCAAATGACGAAAATCGCTGCACAGAGGTGATGGCACCAGTGGCTCACAGTGATAGGAGCCCTGTGCTCCTTTTCATGGGCGGTGGTATGGGAGCTGGCAAGAGCACGGTGCTTAAAGATATTCTCAAAGAGCCTTTTTGGGTAGGAGCAGCTAGCAATGCTGTTGTTATTGAGGCAGATGCATTCAAAGAATCAGATGTTATCTATAGGGCCCTTAGTTCAAGAGGGCATCATGACATGATCCGAATGGCTGAATTGGTACACCAATCATCAACAGATGCGGCCTCATCGCTCCTAGTAACAGCACTGAACGAAGGAAGAGATGTGATTATGGATGGAACATTCTCTTGGGTACCATTTGTTGTGCAAACAATAACAATGGCCAGGAATGTCCATCGCCGTCGTTACAGAATGGGAGCTGGCTACAAGGTTCATAATGATGGTACTACAACAGAGAGCTATTGGGAACGAATTGAAAATGAAGAACCTGAACAAGTTGGAGGCAAAAAGAGAAAACCATATAGAATAGAGCTTGTTGGAGTAGTATGTGATGCTTACCTTGCAGTCATTAGAGGCATAAGGAGAGCTATCATGTGTAGAAGAGCAGTAAGAGTGAAATCACAATTGAAATCCCACAGGAGATTTGCAGATGCATTCATGACTTATTGTCAACTAGTCGATAATGCTCGGCTATACAGCACAAATGCTTTGGAAGGCCCGCCCAAATTGATAGGATGGAAAGAGAGGGACAAGACATTGCTAGTTGATCCAGATGAAATTGATTGTTTGAAGAGAGTTGCTAGGTTGAATGAAGATGCTGACTCCATATATGAACTTTACAAGCACCCTAACCCGACTTGTGAAGCCGGATCAATATGGAAAGACATTGTATTATCTCCTTCAAGGTTGGACATTCAACAAGAGCTGAAGTATTCAATTCAAAAGGTTGAGAGATATGCAATGCAAAATGCTAGCTTGTTGATGGAGCAATGA 1557 0.4162 MQKDYNGKPSVTQIVVASSIGLIIAAAMHYRLKKLRGRKIIPLVRLSKTGQSPKLERFSHYVARQMGFKDRRNCPNLCKLASEYIRKSEGCEDDIYAFFENEPNVDSLFVKLVEEFERCILSYFAFHWSLGDLLISQVLSSDTEPKKKFKHMVMAATRDQRVERVTKNLKVARVFNTLVEEMKAMGLVSNDENRCTEVMAPVAHSDRSPVLLFMGGGMGAGKSTVLKDILKEPFWVGAASNAVVIEADAFKESDVIYRALSSRGHHDMIRMAELVHQSSTDAASSLLVTALNEGRDVIMDGTFSWVPFVVQTITMARNVHRRRYRMGAGYKVHNDGTTTESYWERIENEEPEQVGGKKRKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVKSQLKSHRRFADAFMTYCQLVDNARLYSTNALEGPPKLIGWKERDKTLLVDPDEIDCLKRVARLNEDADSIYELYKHPNPTCEAGSIWKDIVLSPSRLDIQQELKYSIQKVERYAMQNASLLMEQ* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2443 518 Pfam Zeta toxin 203 353 IPR010488 GO:0005524|GO:0016301
Mtr1g2443 518 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 204 340 IPR027417 -
Mtr1g2443 518 PANTHER UNCHARACTERIZED 2 513 IPR044802 -
Mtr1g2443 518 Gene3D - 190 439 IPR027417 -
Mtr1g2443 518 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2443 Mtr-Chr1 35090257 35094390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2443 - - mtr:MTR_1g070385 1020.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2443 1 35090257 35094390 Mtr1g2443 1 35090257 35094390 ECH
Mtr7g2870 7 45494502 45498925 Mtr1g2443 1 35090257 35094390 PCT