Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2418 ATGTTTACCAGGTCAAGAAATGCTAGTGCTTTTGGTATATTCAAATGGAAACGTCAAGGTGAATCGTCGGTGACGGAAAGTCTAATTCAGGATGTTCCTCCAGAGATTGAACTGTCTGATTACAGAAGGATCCCAAGTCCAGGAAGCGAGAGCCCTTCAGGGCTACTTAATGGTGATAGCCCTAATATCGAGCCAATTGGTGACTTGGATCTCTTCTTCGAAAGACTTTACAGCTACTACTGTGAGAAAGGGCTATGGTGCATCATCATAAAGTGGATTGTCGAACTTCTGAGTCTCGGATTCACTATATGTTTTTCGGCATTTTTTTTACTTTATGTTGATTGGAATGGACTCCGTAATGCTAAATGTGGGATGGATGCTGTGGAATCCGGGATGAAGCCCTGTGATCTCGCTAAAGAAGCTCTTCATCAACACCCTTTAACCCCGTTAACACTTAGCAAAGCTATTATTGTTGGATACTTAGGAATATTTTCTATCTATTGGATATTTTGCTTCTTAAGATTCTTTGCTCAACTAAAGGACACTATGGAAATCCGAGAGTTTTTCTACCATAGTCTCCATGTTACCGATAGTGAAATTCAAACAATGCCGTGGGCTACAGTTCTTGAAAAGGTTGTTCTTGTGCAAAGCTCGAGACAGCTATGTGTGATAAAGGATCTTAATGCTCATGACATCGTGATGAGGTTAATGCGGAAGGAGAACTACTTGATTGGAATGCTCAACAAGGGTGTGCTTGCTTTTCCCATATCTCAGTGGGTTCCAGGTGCTGGTCCAACAGTGAAATCCAGTACCAATGGAACACAATATCGCCTAGTACTAACCAAGACTCTTGAGTGGACTTTGAATTGGTGCATTCTGCAAAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTTGTGTCAAATCCAAGGACATTAAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTTTCTCCATTTCTCATCATATTCATGCTGGTATATCTCTTTCTGAGGCATGCTGAACAATTTTACAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAATTTGTCAAGATGGGTCTTTAGGGGATTCAATGAGGTGGACCATCTCTTCAGGCATCGAATTAATAGCAGTGTATTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCCATCATATCCATCATCGCAAAATTCATCTCATTTGTATCAGGTGGCTTTGCTGCAATTCTGATCATCATTGCTTTTCTAGAGGAATCTCTGCTGGAGGGCCATATATTTGGTCGGAACTTGTTGTGGTATGCTGCTGTTTTTGGAACTATAACTGCTATTAGCCGGGCTGCAATTGTTAATGAGCTTCTGGTCATAGACCCTGAAGGAGCAATGTCTATGGTAGTTCAGCATACACATTATATGCCAAAGAGATGGCGTGGCAAAGAAAGTACTGAAATGGTCCGAATTGAGTTTGAAACCTTATTCCAGTATACTGGAATGATGTTACTTGAAGAGATGGCCTCAATTTTCCTTACTCCATACTTACTCCTGTTGGTTGTTCCAAAGCATGTTGATGATATCTTGCAGTTTATTGAAGATTTTACTGTGGATGTTGAAGGTGTTGGTGATGTATGCAGTTTTAGTGTCTTTGATTTTCAAAAGCATGGAAACAGCAGATATGGTTCTCCGTACGATTCACCTTGCAGCAAAAGAAGTTCCCAGGGGAAGTTGGAGAAATCATTTTTAAGCTTCCAAAGTAGTTATCCTTCATGGGAACCAAATGCTGCGGGGAAGCAGTTTTTGCTAAATCTGAGAACATTCAGAGAGCAAAAGTTATCAGGACATGTAAACAGACAAGGATTTCCCCCTCTCAGAACGTGGAGAGGTAGTCCCAACACGAGAAGCAATTTAGACAACAGAAATAGGTTTTTATCCAGAGATATGTCAAACAGCACCTTTGCAACCGGCAATCACTTAGGTTCATTGTGGTTTATTGAAGCCAACAATCAAAACAATCATCCTTATCTTCTCGACTGGTACTATACTTCCGGCCCACGTGATGCGACTTCAAGAGATGTTCCAACTGATCCATTTGAAGAAACTCGACATCTCTCCAGAAATTGGATGCCGTCCAACTTGACACGGAATGAACCTGAGTATGAAGAATACGTAAACACATATCATGATGATCGCACTGCTTCTCCTCTTGGGGCTTCCACATCTGCTCCCATATTTAAGGATAGCATAATTCAGGATCAAGATTCCAATGATCTACACCACCCTACCAGGAGTCATTGGTGGGCTAGAAGTCATCATCAGGAGGGTGGACATGGTCAAACAAGCTTTTTTGAGCCTCCAAATTTCAATCACGAAAGAGCATACAATATTTACAACGATAAATTATCTGATATAGGGTCAGAGAATGAAGATCAGGAACAAGAGATGTACTGGAGTTATCACAAATCATCTCATAAAGAACATATAGATGACTTAGAATCAGGAGAATATAATCTACATTTTGATGATATTTATAGCAGACCTCCAGTAAATTCCACTGTAAATCCAAACACTACAATCTTTTGA 2601 0.4052 MFTRSRNASAFGIFKWKRQGESSVTESLIQDVPPEIELSDYRRIPSPGSESPSGLLNGDSPNIEPIGDLDLFFERLYSYYCEKGLWCIIIKWIVELLSLGFTICFSAFFLLYVDWNGLRNAKCGMDAVESGMKPCDLAKEALHQHPLTPLTLSKAIIVGYLGIFSIYWIFCFLRFFAQLKDTMEIREFFYHSLHVTDSEIQTMPWATVLEKVVLVQSSRQLCVIKDLNAHDIVMRLMRKENYLIGMLNKGVLAFPISQWVPGAGPTVKSSTNGTQYRLVLTKTLEWTLNWCILQSMFDRNFCVRRDFVSNPRTLKKRLMVVGLAMLLLSPFLIIFMLVYLFLRHAEQFYNHPSTASSRRWSNLSRWVFRGFNEVDHLFRHRINSSVLHASDYLKQFPSPIISIIAKFISFVSGGFAAILIIIAFLEESLLEGHIFGRNLLWYAAVFGTITAISRAAIVNELLVIDPEGAMSMVVQHTHYMPKRWRGKESTEMVRIEFETLFQYTGMMLLEEMASIFLTPYLLLLVVPKHVDDILQFIEDFTVDVEGVGDVCSFSVFDFQKHGNSRYGSPYDSPCSKRSSQGKLEKSFLSFQSSYPSWEPNAAGKQFLLNLRTFREQKLSGHVNRQGFPPLRTWRGSPNTRSNLDNRNRFLSRDMSNSTFATGNHLGSLWFIEANNQNNHPYLLDWYYTSGPRDATSRDVPTDPFEETRHLSRNWMPSNLTRNEPEYEEYVNTYHDDRTASPLGASTSAPIFKDSIIQDQDSNDLHHPTRSHWWARSHHQEGGHGQTSFFEPPNFNHERAYNIYNDKLSDIGSENEDQEQEMYWSYHKSSHKEHIDDLESGEYNLHFDDIYSRPPVNSTVNPNTTIF* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2418 866 PANTHER AUTOPHAGY-RELATED PROTEIN 9 1 856 - -
Mtr1g2418 866 Pfam Autophagy protein ATG9 64 557 IPR007241 GO:0006914
Mtr1g2418 866 PANTHER APG9 AUTOPHAGY 9 1 856 IPR007241 GO:0006914
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2418 Mtr-Chr1 34745780 34752445 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2418 K17907 - gmx:100809347 1403.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2418 1 34745780 34752445 Mtr1g2418 1 34745780 34752445 ECH
Mtr7g2886 7 45668049 45674607 Mtr1g2418 1 34745780 34752445 PCT