Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2334 ATGGCTTCTGATTCCAATTCAAACCTTAGAATCACCATAGAAAGCAATCCTTCAGAGCCACGCTTAGCTGAATTGAACATCAAGTGCTGGCCCAAATGGGGGTGTTCACCAGGTAAATACCAATTAAAGTTTGATGCAGAGGAGACATGCTATTTGTTGAAAGGAAAGGTAAAAGCATACACAAAAGGGTCATCAGAGTTTGTAGAGTTTGGTGCTGGAGATCTTGTGACAATTCCAAAAGGACTAAGTTGTACTTGGGATGTTTCTATTGCTGTTGATAAGTACTACAAATTTGAAGCTTCATCTTCTTAA 312 0.391 MASDSNSNLRITIESNPSEPRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSEFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFEASSS* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2334 103 PANTHER OS04G0445200 PROTEIN 2 103 - -
Mtr1g2334 103 Pfam EutQ-like cupin domain 23 96 IPR008579 -
Mtr1g2334 103 SUPERFAMILY RmlC-like cupins 29 88 IPR011051 -
Mtr1g2334 103 Gene3D Jelly Rolls 2 98 IPR014710 -
Mtr1g2334 103 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 2 103 - -
Mtr1g2334 103 CDD cupin_TM1112-like 30 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2334 Mtr-Chr1 33917957 33918903 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2334 - - gmx:100793722 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2334 1 33917957 33918903 Mtr1g2334 1 33917957 33918903 ECH
Mtr7g2977 7 46596983 46597804 Mtr1g2334 1 33917957 33918903 PCT