Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2329 ATGTCGAATCTCTGCACTCTTTCTTCTTCTTTCATCTTCAACAATATTCAACCTTTCAAATTCTGCAATTCAACAAAGAATCATCATCGCTGCAGAAATTTGAAGCTCAAAATGTGCTCCTCCTCCTCCTCCGTTCCTCAAAAGGCCACCGTTGTGGGTTGTGGATCAGTCACCGTCGATTTCTTGGCTACCGTTTCTGCTTACCCTAAACCAGATGATAAAATCAGAACTACCAATTTGAAGGTTCAAGGAGGTGGTAATGCCGGCAATGCTTTAACCTGCCTTGCTCGTTTAGGTCTAAACACAAGGCTCATTTCTAAGATTGCGGATGACAGCCCAGGCAAGGGCATATTAGATGAGCTACGCACTGATGGTGTGGATACATCTTTTATTGTGGTATCTAAAGAGGGAACTTCACCATTTACGTACATTATCGTGGACAATGAAATGAAGACTCGAACTTGTATACATACCCCTGGATATCCTCCAATGATACCCCAAGATCTTTCAGAATCAAGTTTGTTATCTGCATTGGATGGAGCAAGCATTGTATATTTTGATGGGAGATTGTATGAAACTGCTCTAGTTGTTGCCCATGAGGCAGCTAGGAAGAATATACCCATCTTAATTGATGCAGAAAGGCCAAGGGAAGGGTTGGATGATCTCCTAGAATTAGCTGATTATGTTGTATGCTCGGCTAAATTTCCAAAGGCATGGACAGAGGCATCAACTGTTCCACGAGCACTTGTTTCTATCCTTTTAAGGTTGCCCAACGTAAAATTTGTGGCTGTAACTTTGGGAAAAGATGGTTGTATACTGCTCGAGAGAAGTGTCAATGCAAGTCCTGCCACAGAAGAAGTGGATGTAGACAACTTAGTGGAATCGCTGGAGTTAAGAAAGGATAAGAGTGCATCAATTCCAACCTGCATATCATCGTCAGTGGCAAAATTAAAGGCAGAAGGAGTAGGAACGGTTATCGGGAAATTATACGTCGGTACAGCTGAGAGCATTCCACCCTCGGAGCTTGTTGATACCACTGGTGCCGGGGATGCATTTATTGGATCTGTGATATATGCTATTTGTTCGAAGTTCTCACCAGAGACAATGCTACCCTTTGCTGCTAATGTGGCAGGTGCCAAGTGCAGAGATCTAGGAGCACGAAGCGGTCTTCCATACCGTGCAGATCCACGCCTAGCATCCTTTATTCAGTAG 1212 0.4365 MSNLCTLSSSFIFNNIQPFKFCNSTKNHHRCRNLKLKMCSSSSSVPQKATVVGCGSVTVDFLATVSAYPKPDDKIRTTNLKVQGGGNAGNALTCLARLGLNTRLISKIADDSPGKGILDELRTDGVDTSFIVVSKEGTSPFTYIIVDNEMKTRTCIHTPGYPPMIPQDLSESSLLSALDGASIVYFDGRLYETALVVAHEAARKNIPILIDAERPREGLDDLLELADYVVCSAKFPKAWTEASTVPRALVSILLRLPNVKFVAVTLGKDGCILLERSVNASPATEEVDVDNLVESLELRKDKSASIPTCISSSVAKLKAEGVGTVIGKLYVGTAESIPPSELVDTTGAGDAFIGSVIYAICSKFSPETMLPFAANVAGAKCRDLGARSGLPYRADPRLASFIQ* 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2329 403 PRINTS Ribokinase signature 53 74 IPR002139 GO:0016301
Mtr1g2329 403 PRINTS Ribokinase signature 80 99 IPR002139 GO:0016301
Mtr1g2329 403 PRINTS Ribokinase signature 262 273 IPR002139 GO:0016301
Mtr1g2329 403 Gene3D - 49 388 IPR029056 -
Mtr1g2329 403 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 37 403 - -
Mtr1g2329 403 CDD ribokinase_group_B 51 392 - -
Mtr1g2329 403 Pfam pfkB family carbohydrate kinase 50 278 IPR011611 -
Mtr1g2329 403 Pfam pfkB family carbohydrate kinase 330 391 IPR011611 -
Mtr1g2329 403 SUPERFAMILY Ribokinase-like 49 395 IPR029056 -
Mtr1g2329 403 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 37 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2329 Mtr-Chr1 33856491 33862154 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2329 - - mtr:MTR_1g069320 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2981 7 46632663 46637316 Mtr1g2329 1 33856491 33862154 PCT