Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2316 ATGGAGGAAGCACTGGAACTAGCACGGGCGAAGGACGCGAAGGAACGCATGGCAGGTGTAGAGCGTCTCCATCAAGTTCTAGAAGCTTCTAGAAAAACTCTAAGTTCAACCGAAGTTTCATCACTCGTCGATTGTTGCTTGGATCTCTTGAAGGATAATAGTTTTCGCGTTTCGCAAGGTGCGCTTCAAGCTTTGGCTTCCGCTGTTGTTCTCTCCGGCGATCATTTTAAGCTTCATTTCAATGCGCTTGTTCCGGCGGTTGTTGATCGGTTAGGTGATGGTAAACAACCTGTTAGAGATGCTGCTAGAAGACTCTTGCTCACTCTCATGGAGGTTTCATCTCCTACAATAATTGTTGAAAGAGCGGGGTCTTTTGCTTGGACATGCAAAAACTGGAGAGTCAGAGAAGAGTTTGCTCGAACCTTGACATCTGCAATTGGTCTATTTTCATCCACTGAACTACCCCTTCAACGGGCTATTCTTCCTCCTACTTTGCAATTGCTGAGCGATCCCAATCCTGCTGTCAGGGAAGCAGCTATTTTGTGCATTGAGGAAATGTATGCACACGCTGGGTCTCAATTTCGTGATGAACTTCAGCGCCACGACCTCCCTTCTTCTTTGGTGAAATATATTAATGCTAGGCTAGAGGGAATTCAACCAAAAGTTCAGTCTTCAAATGGTATTTCTAGTGGTTATATCACTGGAGAAATTAATCCTTTGAATGCTAATCCCAAGAAAAGTAGTCCAAAGGCTAAAATTTCCTCAAAGGAGACATCTCTTTTTGGAGGAGAAGGTGATGTCACCGAGAAAGGCATTGAACCTATCAAGGTGTATTCAGAAAAGGAATTCATCAGGGAAATCGAGAAGATTGTATCGACCCTTGTACCAGAAAAGGACTGGTCAATACGAATTACTGCCTTGCAGAGAATCGAACGTCTTGTTTTGGGAGGAGCTGCTGATTATCCGTGTTTTTTTGGAGTCCTAAAACAGCTTGTTGGACCATTAAGCACACAACTATCTGATCGAAGGTCTACCATTGTGAAACAGGCATGCCATCTGTTATGTTTTTTGTCGCAAGACCTCCTGGGTGATTTTGAAGCATGTGCTGAAATGTTCATACCAGTTCTTTTGAAGCTGGTTGTGATTACTGTGCTTGTAATTGCAGAGTCTGCAGATAACTGCATTAAAACGATGCTACGCAATTGCAAAGTTGCTCGTGTGCTTCCTCGGATAGTTGATTGTGCAAAAAGTGACCGCAGTGCAATACTCCGTGCAAGGTGCTGTGATTATGCTCTTTTGATACTAGAACATTGGCCTGATGCACCAGAAATACAACGATCAGCTGACTTATACGAGGATATGATAAGGTGTTGTGTTTCGGACGCAATGGGCGAGGTGCGGTCGACTGCAAGGATGTGCTACAGAATGTTTGCAAAAACTTGGCCGGAGCGTTCCCGTCGCCTATTTTCATCCTTTGACCCTTCTATTCAAAGGTTAATAAATGAAGAAGATGGAGGCAAACATAGGCGACATGCATCGCCTTCCATTCGTGATAGAAGTGCACCGATGTCATCTTCCAGTCAAGCTTCAACTCCTAATCTATCTGGTTATGGAACTTCAGCTATTGTTGCAATGGACAGAAGTTCTAGTTTATCATCGGGGACTTCTATCTCCTCTGGTGTTCTTCTTTCACAAGCTAAGTCACTTGGTAATGGCACAGAACGTAGTTTAGAAAGTGTACTGCATGCAAGCAAACAGAAGGTCAGTGCTATTGAGAGCATGCTTAGAGGTTTGGATTTGTCAAATAAGCATAATTCATCTGCTCTGCGATCTTCAAGTTTGGATCTAGGAGTTGACCCTCCCTCATCTCGTGATCCCCCATTCCCTGCTGCTGTTTCAGCCTCTAATCATCTGACCACTCCTTTAACAACAGAGTCACCTGGTTTGGGCGTCAATAGAGGTAGTATCCGGAACGGTGGTATGGGTTTGTCTGATATAATCACCCAAATTCAAGCTTCCAAAGATTCGGGCAAGTTATCGTATAATAGCAATGTTGGTATTGAGCCTTCATCAGATTTTTCATCATACACAAGTAAAAGGACTAATGAAAAATTACAAGGAAGAAGTTCTGTTGATGAAAACAGTTACATCCGGGAGACTAGGCGGTATATGAACCCCAATGTGGATAGGCAGTATATGGATGCTCTTTATAAAGATGGAAACTTTAGGGATTCACAGAATAGTTGTGTGCCTAATTTTCAGAGGCCACTATTAAGAAAGAACGTAGCTGCACGCGTGTCTTCTGGTAGGAGAAGGAGTGTTGATGACAGTCAATTATCTACTGGAGAGATTTCAAATTATGCAGATGGACCGGCATCTATTCATGAAGCCCTGAGTGAAGGACTTAGTTCAGGTTCTGACTGGTCTGCCCGGGTTTCTGCCTTCAATTACCTTCACTCGTTATTGGAGCAAGGTCAAAAGGGAATTCAAGAAGTAGTCCAGAATTTTGAGAAGGTAATGAAGTTATTTTTTCAACACTTGGATGATCCCCATCATAAAATCGCACATGCGGCTCTCTCCACACTTGCAGATATTATTCGTACATGCCGAAAGCCATTTGAGGGTTACATGGAACGGATGTTACCTCATGTGTTTTCTCGTCTAATTGACCCCAAAGAGCTTGTTAGGCAAGCATGCTCTACGACTTTGGAGGCTGTGGGTAAAACATACAGTATAGATTCCCTCTTGCCCGCATTGCTACGTTCTCTTGATGAACAAAGGTCTCCAAAGGCTAAATTGGCTGTTATTGAGTTTGCAATCAGTTCCTTTAACAAGCATGCAATGAATCCGGAAGGTGCTGCAAATATTGGCATCCTAAAATTATGGCTTGCCAAGTTAGCCCCATTGGTTCACGATAAAAATACAAAGCTTAAAGAAGCAGCTATTACGTGCATTATATCAGTATACTCTCACTTCGATTCATCTGCTGTTTTGAATTTTATTCTTAGTTTGTCAGTTGATGAACAAAATTCTTTGAGACGAGCCCTTAAACAGCGCACCCCTCGCATTGAAGTAGACTTAATGAACTATTTGCAGAACAAGAAAGAGCGGCGTAGCAAGTCTTCCTATGATCCATCTGATAATGTAGGAACATCCTCTGAAGAGGGATATGCTGGTTTGTCTAGGAAAGCACATTACGTTGGGAGGTATTCTGGTGGTTCTCTAGATAGTGATGGTGGCAGGAAATGGAGTTCCCAAGATTCGAACCTGATTAAAGCCAGTCGTGGCCAACCAGCTTCAGATGAAACTGAGGAACATTTGTATCAAAATCTTCAGACTAATTGTGATAGTGATATTGTTGGTTCAAAAGCCAAAGATCTTGCTTACAGTATCGATTCAATGGATCAAAACTTTGGCTTTCAAACTGACCGACTTGGATACGTGGATAGTACCATGAACTTTGAAGGTCTGCCATCTGATGTGGATGTTAATGGTGTGATGTCATTAGAACATTTAAATATTGCCGAAGGCTTTGAACATCTTTCTGAATTGAACCATAATCATCACTCAGCTGAAGACGTGAAGGTCAACCACATGACAAACACAGGACTCAGTATTCCTCAAATTCTTCATATGATATGTAGTGGGGGTGATGGAAGCACTATTTCAAGTAAGCGGACTGCACTTCTACAGTTAGTTGAAGCTTCTGAAGCAAATGATCATTCTGTTTGGATCCAGTACTTCAATCAGATTTTGACCGTTGTGCTTGAGGTGCTGGATGATTCAGATTCCTCAATCAGAGAGCTTGCTCTTTCGTTGATAGTTGAAATGCTTAAAAACCAGAAAGATGCCATGGAAAATTCAGTTGAGATTGTTATTGAAAAGCTGCTTAATGTTACAAAGGATACTGTTCCCAAGGTCTCAAACGAAGCGGAGCACTGCCTGACAATTGTTTTATCTCAGAATGATTCATTCAGATGTTTAAGTGTCATTATCCCTCTACTGGTTACCGAGGACGAGAAAACTCTAGTCACTTGCATAAATTGCTTGACTAAGATTGTGGGGCGGCTCTCTCCGGAGGAACTGATGGGTCAGTTACCCTCATTTCTCCCTGCATTGTTTGAAGCTTTTGGAAACCAGAGTGCGGATATTCGTAAGACTGTTGTTTTCTGTCTAGTGGATATTTATATCATGCTTGGGAAAGCATTCTTGCCATATTTGGAAGGGCTAAGCAGCACACAGTTGAAGTTGGTTACCATTTATGCAAATCGAATCTCACATGCAAGGACAGGAAAATCAATTGATGCTGCTATCGATTAG 4320 0.4234 MEEALELARAKDAKERMAGVERLHQVLEASRKTLSSTEVSSLVDCCLDLLKDNSFRVSQGALQALASAVVLSGDHFKLHFNALVPAVVDRLGDGKQPVRDAARRLLLTLMEVSSPTIIVERAGSFAWTCKNWRVREEFARTLTSAIGLFSSTELPLQRAILPPTLQLLSDPNPAVREAAILCIEEMYAHAGSQFRDELQRHDLPSSLVKYINARLEGIQPKVQSSNGISSGYITGEINPLNANPKKSSPKAKISSKETSLFGGEGDVTEKGIEPIKVYSEKEFIREIEKIVSTLVPEKDWSIRITALQRIERLVLGGAADYPCFFGVLKQLVGPLSTQLSDRRSTIVKQACHLLCFLSQDLLGDFEACAEMFIPVLLKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIVDCAKSDRSAILRARCCDYALLILEHWPDAPEIQRSADLYEDMIRCCVSDAMGEVRSTARMCYRMFAKTWPERSRRLFSSFDPSIQRLINEEDGGKHRRHASPSIRDRSAPMSSSSQASTPNLSGYGTSAIVAMDRSSSLSSGTSISSGVLLSQAKSLGNGTERSLESVLHASKQKVSAIESMLRGLDLSNKHNSSALRSSSLDLGVDPPSSRDPPFPAAVSASNHLTTPLTTESPGLGVNRGSIRNGGMGLSDIITQIQASKDSGKLSYNSNVGIEPSSDFSSYTSKRTNEKLQGRSSVDENSYIRETRRYMNPNVDRQYMDALYKDGNFRDSQNSCVPNFQRPLLRKNVAARVSSGRRRSVDDSQLSTGEISNYADGPASIHEALSEGLSSGSDWSARVSAFNYLHSLLEQGQKGIQEVVQNFEKVMKLFFQHLDDPHHKIAHAALSTLADIIRTCRKPFEGYMERMLPHVFSRLIDPKELVRQACSTTLEAVGKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAISSFNKHAMNPEGAANIGILKLWLAKLAPLVHDKNTKLKEAAITCIISVYSHFDSSAVLNFILSLSVDEQNSLRRALKQRTPRIEVDLMNYLQNKKERRSKSSYDPSDNVGTSSEEGYAGLSRKAHYVGRYSGGSLDSDGGRKWSSQDSNLIKASRGQPASDETEEHLYQNLQTNCDSDIVGSKAKDLAYSIDSMDQNFGFQTDRLGYVDSTMNFEGLPSDVDVNGVMSLEHLNIAEGFEHLSELNHNHHSAEDVKVNHMTNTGLSIPQILHMICSGGDGSTISSKRTALLQLVEASEANDHSVWIQYFNQILTVVLEVLDDSDSSIRELALSLIVEMLKNQKDAMENSVEIVIEKLLNVTKDTVPKVSNEAEHCLTIVLSQNDSFRCLSVIIPLLVTEDEKTLVTCINCLTKIVGRLSPEELMGQLPSFLPALFEAFGNQSADIRKTVVFCLVDIYIMLGKAFLPYLEGLSSTQLKLVTIYANRISHARTGKSIDAAID* 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 690 713 - -
Mtr1g2316 1439 SUPERFAMILY ARM repeat 281 1428 IPR016024 -
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 604 618 - -
Mtr1g2316 1439 Gene3D - 1220 1430 IPR011989 -
Mtr1g2316 1439 Gene3D - 1 222 IPR011989 -
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 500 535 - -
Mtr1g2316 1439 ProSiteProfiles HEAT repeat profile. 160 198 IPR021133 -
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 1034 1055 - -
Mtr1g2316 1439 Gene3D - 795 1020 IPR011989 -
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 518 535 - -
Mtr1g2316 1439 SMART TOG_3 270 514 IPR034085 -
Mtr1g2316 1439 SMART TOG_3 1192 1433 IPR034085 -
Mtr1g2316 1439 SMART TOG_3 3 224 IPR034085 -
Mtr1g2316 1439 SMART TOG_3 786 1028 IPR034085 -
Mtr1g2316 1439 ProSiteProfiles HEAT repeat profile. 83 121 IPR021133 -
Mtr1g2316 1439 Pfam CLASP N terminal 285 500 IPR024395 -
Mtr1g2316 1439 Pfam CLASP N terminal 803 996 IPR024395 -
Mtr1g2316 1439 Pfam HEAT repeat 160 188 IPR000357 GO:0005515
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 690 718 - -
Mtr1g2316 1439 Coils Coil 10 30 - -
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 604 651 - -
Mtr1g2316 1439 MobiDBLite consensus disorder prediction 633 651 - -
Mtr1g2316 1439 PANTHER PROTEIN, PUTATIVE-RELATED 28 1431 - -
Mtr1g2316 1439 Coils Coil 1275 1295 - -
Mtr1g2316 1439 Gene3D - 267 509 IPR011989 -
Mtr1g2316 1439 SUPERFAMILY ARM repeat 2 402 IPR016024 -
Mtr1g2316 1439 PANTHER CLASP 28 1431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2316 Mtr-Chr1 33667435 33683058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2316 K16578 - gmx:100801377 2345.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2316 1 33667435 33683058 Mtr1g2316 1 33667435 33683058 ECH
Mtr7g2988 7 46743002 46760294 Mtr1g2316 1 33667435 33683058 PCT