Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2150 ATGGCCTTTCCTTTCATATTTCTCTTTGCTAGTTTATTCTTTATGGCTTCTTCAAGCAATGCCTATTGGCCACCTTCCCCCGGTTACTGGCCAAGTTCCAAAGTCAGGTCTATGAGCTTTTACAATGGTTATAGAAACCTTTGGGGACCTCAACACCAAAGCATGGATCAACATGGAACAACTATTTGGCTTGATAGAACCTCAGGAAGTGGATTCAAGTCGAATCGTCCATTTCGATCGGGATACTTTGGCGCTTCGATTAAGCTTCATCCTGGCTACACTGCAGGAGTTATAACAGCTTTTTATCTTTCTAACAATGAAGCACATCCAGGATTTCATGATGAAGTAGACATTGAATTTCTAGGGACAACATTTGGAAAGCCTTATACTTTGCAGACAAATGTTTATATAAGAGGGAGTGGTGATGGAAAAATTATAGGCAGAGAAATGAAATTTCATCTGTGGTTTGATCCTACCAAAAAATTTCATCACTATGCTATAGTTTGGAATCCTAAGGAATTAATATTCCTAGTGGATGATATGCCCATAAGGAGGTACCCAAGGAAGAGTGATGCAACATTTCCACTAAGACCAATGTGGGTTTATGGGTCTATTTGGGATGCTTCATCATGGGCAACAGAAGATGGAAAATACAAAGCTGATTACAAGTACCAACCTTTTGTTGCAAAGTACACAAACTTCAAGGCTAGTGGTTGCACAGCCTATGCGTCGCGTTGGTGTCGTCCGGCCACGGCCTCGCCGTATCGGTCCGGTGGGTTGACAAGACAACAACATTGGTCTATGAGTTGGGTTCAAAGACACCACATGGTTTATAACTATTGCCAAGATCCTAAAAGGGACCATAGACTAACACCTGAATGTTGGGGTTAA 891 0.4175 MAFPFIFLFASLFFMASSSNAYWPPSPGYWPSSKVRSMSFYNGYRNLWGPQHQSMDQHGTTIWLDRTSGSGFKSNRPFRSGYFGASIKLHPGYTAGVITAFYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFHLWFDPTKKFHHYAIVWNPKELIFLVDDMPIRRYPRKSDATFPLRPMWVYGSIWDASSWATEDGKYKADYKYQPFVAKYTNFKASGCTAYASRWCRPATASPYRSGGLTRQQHWSMSWVQRHHMVYNYCQDPKRDHRLTPECWG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2150 296 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 3 295 IPR044791 GO:0004553
Mtr1g2150 296 PIRSF EndGlu_transf 5 296 IPR016455 GO:0010411|GO:0016762|GO:0042546
Mtr1g2150 296 Gene3D - 20 294 - -
Mtr1g2150 296 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 3 295 - -
Mtr1g2150 296 SUPERFAMILY Concanavalin A-like lectins/glucanases 62 282 IPR013320 -
Mtr1g2150 296 Pfam Glycosyl hydrolases family 16 42 223 IPR000757 GO:0004553|GO:0005975
Mtr1g2150 296 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 19 231 IPR000757 GO:0004553|GO:0005975
Mtr1g2150 296 Pfam Xyloglucan endo-transglycosylase (XET) C-terminus 255 294 IPR010713 GO:0005618|GO:0006073|GO:0016762|GO:0048046
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2150 Mtr-Chr1 31598410 31601147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2150 1 294 Glycoside Hydrolase AT3G44990 65.306 6.13e-141 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2150 K08235 - gmx:100796698 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2150 1 31598410 31601147 Mtr1g2150 1 31598410 31601147 ECH
Mtr7g3123 7 48213985 48216639 Mtr1g2150 1 31598410 31601147 PCT