Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2144 ATGTTCAAGAAAATGATGAAAGGAGGGCATAAAAAGCCCTCCAAATCGGATTCAACCGATCCACCACCGTCCGGTAACAACCGCAATTCAGCAGCTCCGGTTATCGTCAACCATGGCTCCCGTGGCGGTGCCTCCACCGTAAATTCCGGCGTCGTGATGCCTTTGACTCCATCTTCCGGTACAATGGAACCCGTTCCTTTATTCCGCGATGTTCCGGTTTCCGAGAGACAAAATATCTTTCTGAGGAAACTTCATGTATGTTGTTTCTCGCTTGATTTCACTGATACGCTGAAGAGCGTTCGCGAAAAAGAGATCAAGCGTCAAGCTTTGATAGAGCTTGTTGAGTTTATTCAATCGGGTTCGGGGAAAATTTCGGAGAATTGTCAAGAAGAGATGATTAGGATGATATCTATCAACATTTTCCGGTGCTTGCCGCCTGCGTCGCATGAGAACACCGGGACTGAGCCGACTGATCCTGAAGAGGAAGAGCCTTGTTTGGAGCCGGCATGGCCACACTTGCAACTGGTTTATGAGCTTTTGCTTAGATATGTGGTTTCATCTGATACTGATACAAAGGTTGCAAAACGGTACATTGATCATTCCTTTGTGTTAAAGTTGCTAGATTTATTCGATTCTGAGGATCCTCGTGAGCGTGAGTATTTGAAAACTATTCTGCATCGTATATATGGAAAATTCATGGTTCATAGACCGTTTATTAGAAAAGCAATTAACAATATTTTTTATCGGTTTATATATGAGACTGAGCGACACTGTGGTATTGGGGAGCTTTTGGAGATTTTGGGTAGTATTATTAATGGGTTTGCTTTGCCTATGAAAGAGGAGCATAAGTTGTTTCTTGTTAGGGCTCTTTTGCCTTTGCATAAGCCGAAATCGGTTGTTATGTACCACCAACAGTTGTCTTACTGCATAACTCAGTTTGTGGAAAAGGATTTTAAGCTCGCTGATACGGTTATTCGGGGTTTGTTGAAGTATTGGCCTGTTACTAATTGTCAGAAGGAAATTCTCTTTCTTGGAGAACTTGAGGAAGTGTTGGAGGCAACACAGAATGCTGAATTTCAACGCTGCATGGTTCAACTTTTCAAACAGATTTCCCGCTGCCTCAACAGTTCCTTTCAGGTTGCAGAGCGAGCCCTCTTTTTATGGAATAATGAGCATATTGTGGGCTTAATTGCTCAAAACAGGACTGTGATATTACCGATAATATTTGAAGCATTTGAGAGAAATATCGAGAGTCACTGGAACCAGGCAGTTCATGGGCTGACTGTTAATGTTCGCAAAATGTTTATAGAAATGGATGCTGAATTATTTGAAGAGTGCCAGAGGAATTATGCAGAGAAGCAAGCAAAAGCCAAAGAAGAGGCTGAGAAGCGGGAATTGAACTGGAAGAGGCTGGCAGAAGCGGCTGCACAGAATGGGGTTGCGGATATGGTCACAGATTAG 1461 0.4305 MFKKMMKGGHKKPSKSDSTDPPPSGNNRNSAAPVIVNHGSRGGASTVNSGVVMPLTPSSGTMEPVPLFRDVPVSERQNIFLRKLHVCCFSLDFTDTLKSVREKEIKRQALIELVEFIQSGSGKISENCQEEMIRMISINIFRCLPPASHENTGTEPTDPEEEEPCLEPAWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHCGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVVMYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEILFLGELEEVLEATQNAEFQRCMVQLFKQISRCLNSSFQVAERALFLWNNEHIVGLIAQNRTVILPIIFEAFERNIESHWNQAVHGLTVNVRKMFIEMDAELFEECQRNYAEKQAKAKEEAEKRELNWKRLAEAAAQNGVADMVTD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2144 486 PIRSF PP2A_B56 4 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g2144 486 Coils Coil 443 463 - -
Mtr1g2144 486 MobiDBLite consensus disorder prediction 1 51 - -
Mtr1g2144 486 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 66 475 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g2144 486 SUPERFAMILY ARM repeat 77 458 IPR016024 -
Mtr1g2144 486 MobiDBLite consensus disorder prediction 18 34 - -
Mtr1g2144 486 Gene3D - 72 474 IPR011989 -
Mtr1g2144 486 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 479 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g2144 486 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2144 Mtr-Chr1 31549825 31555618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2144 K11584 - gmx:100795277 772.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2144 1 31549825 31555618 Mtr1g2144 1 31549825 31555618 ECH
Mtr7g3132 7 48296442 48303528 Mtr1g2144 1 31549825 31555618 PCT