Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2084 ATGAAGGGTGAAACAGTGAACGTAACATGGCTAGGTGGTATTTGGCCAGTTTCACGCAAGAGTGGTTCAGATGAAAATAATGAAATTGGAATTATGGCATTTGAGGTTGCAGGGTTGATGTCTAAGGTTGTTAATTTATGGCATTCTTTGAGTGACAATGAATTAATGAACCTAAGAGAATGGATAGTAAGTTCAGTTGGTGTCAAAATGCTTGTTTCTGATGATGAATATTTCTTGATGGAGCTTACAAGGAATGAGATACTTAATAACTTTCAATCTTTATCACAATCTGTGGCAAGGTTAAGCAAGAAGTGTAAGGATCCAATGTATCACAGCTATGAAAGTTTTGTTCATAACCCTTTTGAAAATTATGTTCAATGGTCAGGTTGGGAATATAGATTGAAAAAGATGGAGAAAAAGGTGAAGAAAATGGAAAGATTTGTTTGTTCTTTGTCACTTTTGTCACAAGAGCTTGAGGTGTTAGCTGAGTGTGAACAAACTTTAAGGCGAATGAAGTTGACTCGCGATGTTGTTAATAAGGCGAAATTGCTCGAGTTTCAGAAGAAAGTTATGTGTCAGAGGCAACAAGTGCAAAATGTAAGAGATTTGTCTCCTTGGAGTAGAAGTTATGACTATATTGTTAGATTGTTGGCAAGATCATTGTTCACAATTCTTGAGAGAATCATACTTGTGTTTGGAAATAGTCATTTACCAATTGAAAATCTAAAAAATGATACTAATAATCGTCTGGCGCGCAACCATTCCTCCCCTGCTCTCCATGTCATGCATTCTTCCGTTCATCCTTCTCCCGAGACGAATCTAAACGAATTTTGTTCAGGGCCTATTGGAAGAAAGAACAAGAGCAAGAAAAAGAAGAAAGATCAACCAGTGCTACTTCATTCACAAGATTCATCATGTGAAAAGCTTCTTCCCTCAGAAGGTAAGCAATTGACATATATTGGATCCTTCAAAGGTTGCATATCTGTTCAAAACGATTCTCATGTAGTACAGAGTTGTATACCATCTAATGGTAGTTCTATGAGGAAAAACATTGATGTCAACACGAAATCGCTCGTCAATAAACCGTCCCTCTTCCACAGAAGTAGAGTTTATTTCAAACTATCTCTCAAGGAAAAGTTAAAACCGATTCCATCAACTCTTGGTGATGCAGCTTTAGCTATACATTATGCAAATGTAATTGTATTGATAGAGAAGATAGTGTCATCACGTCGCACGAATACAATCGATGTTCGAACGAGAGACGATCTTTACAATAAGCTACCGACAACTATAAGAACAGCTCTGAGGGGTAAGCTTAAATGGTATGCCAAAAGTAAGCTTGAAACAGAATGGAATGTGGTACTCAAACAGATATTGGAGTGGTTAGCTCCACTTGCACACAACATGGTAAAGTGGTATTCTGAGAGGAATTTTGAGAAGGAATATACTAGTTTGAAAGCAAATGTTTTACTTGTACAAACTCTTTACTTTGCAAATCAAGCAAAAACTGAAGCTGCAATGGTTGAACTTCTTGTTGGTCTTCATTATGTATGCAGAATTGATGTAGAAACTCGTTTTAGAAGGAATTAG 1590 0.3679 MKGETVNVTWLGGIWPVSRKSGSDENNEIGIMAFEVAGLMSKVVNLWHSLSDNELMNLREWIVSSVGVKMLVSDDEYFLMELTRNEILNNFQSLSQSVARLSKKCKDPMYHSYESFVHNPFENYVQWSGWEYRLKKMEKKVKKMERFVCSLSLLSQELEVLAECEQTLRRMKLTRDVVNKAKLLEFQKKVMCQRQQVQNVRDLSPWSRSYDYIVRLLARSLFTILERIILVFGNSHLPIENLKNDTNNRLARNHSSPALHVMHSSVHPSPETNLNEFCSGPIGRKNKSKKKKKDQPVLLHSQDSSCEKLLPSEGKQLTYIGSFKGCISVQNDSHVVQSCIPSNGSSMRKNIDVNTKSLVNKPSLFHRSRVYFKLSLKEKLKPIPSTLGDAALAIHYANVIVLIEKIVSSRRTNTIDVRTRDDLYNKLPTTIRTALRGKLKWYAKSKLETEWNVVLKQILEWLAPLAHNMVKWYSERNFEKEYTSLKANVLLVQTLYFANQAKTEAAMVELLVGLHYVCRIDVETRFRRN* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2084 529 Pfam Protein of unknown function (DUF668) 386 471 IPR007700 GO:0045927
Mtr1g2084 529 MobiDBLite consensus disorder prediction 263 297 - -
Mtr1g2084 529 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Mtr1g2084 529 PANTHER BNAC09G50660D PROTEIN 5 524 - -
Mtr1g2084 529 PANTHER PLANT/T32M21-140 PROTEIN 5 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2084 Mtr-Chr1 30804040 30806099 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2084 - - gmx:100804666 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2084 1 30804040 30806099 Mtr1g2084 1 30804040 30806099 ECH
Mtr7g3182 7 48813957 48816461 Mtr1g2084 1 30804040 30806099 PCT