Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2039 ATGGCCACCGGAGTTAACAGAAAAATTTCTGCAGCATCAGCTCGTTCTCACACCAGAAGGGCCAAAAAATCTACTTCTTTTCAGCTTCCTTCAGGAATTCTTAGAACAACATTAGCAGTGTTGTTTATTGGGGTTCTAGCATGGGCTTATCAAGTTACGCAAGCTCCTCCTCCCAAAGTATGCGGCTCTCCTGATGGACCACCTATAACAGCACCAAGAATCAAACTAAGAGATGGAAGGCATTTGGCATACAAAGAGCATGGTGTTTCTAAAGATGTTGCAAAGTATAAAATCATCTTTGTCCATGGTATCAGCACTTGCAGGCATGACGCTGTGGTTGCCAACACCCTATCACCCGATGTTGTTAAGGAATTAGGGGTCTACATTGTATCCTTTGATAGACCTGGTTATGGAGAAAGTGATCCCGATCCAAATCGTACGTTAAAGAGCATTGCCTTAGATATAGAAGAGCTTGCGGATCAATTGGGATTGGGGTCCAAATTCTATGTCATTGGTTTTTCCATGGGTGGACAAATTGTTTGGAACTGCCTTAAGCACATACCTCACAGGCTGGCAGGTGCAGCGCTCTTAGCTCCAGTCGTCAACTACTGGTGGCCTGATCTTCCTGCAAACTTAACGGCCGAAGCCTATTCCCAAATGAAATTGCATGACCAATGGGCGCTTCGTGTTGCTCACTACACGCCATGGTTAACCTACTGGTGGAACACTCAAAGATGGTTCCCAAATTTTAGTGTGATTACTGGTGGTCCAGACATCCTTTCGAAACAAGACAAAGAGCTTGTAACTAAGTTGATGAAAAATAGAGAGAATTATGTGATAAGACAACAAGGTGAATATGAAAGCCTCCACCGTGATTTAAATATTGGATTTGGAAGATGGGAATATACACCTTTGGATCTTCAAAATCCATTTCCAAACAATGAAGGTTCTGTTCATCTTTGGCATGGAGATGAAGATATTATGGTTCCTGTCACACTACAACGATACATCGCGCAAAACCTTCCGTGGATTCACTACCATGAACTTCCAGGTTCTGGCCACCTCTTCCCTAATGCTGATGGTGTGAGTGAGACTATCATCAAGTCACTTTTAGGTGTGAAGTAG 1125 0.4329 MATGVNRKISAASARSHTRRAKKSTSFQLPSGILRTTLAVLFIGVLAWAYQVTQAPPPKVCGSPDGPPITAPRIKLRDGRHLAYKEHGVSKDVAKYKIIFVHGISTCRHDAVVANTLSPDVVKELGVYIVSFDRPGYGESDPDPNRTLKSIALDIEELADQLGLGSKFYVIGFSMGGQIVWNCLKHIPHRLAGAALLAPVVNYWWPDLPANLTAEAYSQMKLHDQWALRVAHYTPWLTYWWNTQRWFPNFSVITGGPDILSKQDKELVTKLMKNRENYVIRQQGEYESLHRDLNIGFGRWEYTPLDLQNPFPNNEGSVHLWHGDEDIMVPVTLQRYIAQNLPWIHYHELPGSGHLFPNADGVSETIIKSLLGVK* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2039 374 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 1 371 - -
Mtr1g2039 374 MobiDBLite consensus disorder prediction 1 25 - -
Mtr1g2039 374 SUPERFAMILY alpha/beta-Hydrolases 65 357 IPR029058 -
Mtr1g2039 374 Pfam Alpha/beta hydrolase family 98 358 IPR000073 -
Mtr1g2039 374 PANTHER PUTATIVE-RELATED 1 371 - -
Mtr1g2039 374 Gene3D alpha/beta hydrolase 70 370 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2039 Mtr-Chr1 30126914 30132211 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2039 - - gmx:100500491 640.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2040 1 30133357 30138138 Mtr1g2039 1 30126914 30132211 ECH
Mtr2g2873 2 42379473 42382230 Mtr1g2039 1 30126914 30132211 ECH
Mtr4g1562 4 27349582 27353472 Mtr1g2039 1 30126914 30132211 ECH
Mtr1g2039 1 30126914 30132211 Mtr1g2039 1 30126914 30132211 ECH