Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2029 ATGGCCTTGCAGATTTACATCTCAATCCTTTCCATAGCTGCTTTGGCTCTATGCACTTCAGCAAATCATGATTCGGTTAATTTTAGTTATATTGGACCAAATGGTCCTCTGAAATGGGGAACACTAAAACAATCATTCGCAGCATGCTCAAATGGGAAAGCACAGAGTCCAGTGGATCTTGCAATGACAAATATTGTTGTGAACAATGTATTGAAATCCTTAGACAGAAACTACCTTCCTACAAATGCCACACTTGTTAACCACCAATACAGTATTGGGGTGCATTTTGAAGGAAAAGTGGGCGATATTAATATAAATGGAATGAATTATTCATTGAAACAACTTCATTGGCATGCACCTGCAGAGCACAGGGCTCATGGTCGTTTACATGACGCCGAGCTCCACTTAGTTCACTTCACAGAAGATAACAATAACATAGCAGTTGTGGCACAGCTCTATAGATTGGGTGTTCCTGATCCTCTAATCTCCAAGATTGAAGACAAGTTCTATAAGCTAGTCAATGAGAACCATGCAGGCAATAAAAATGCTAACATTGCTCTTGGCACCTTTGATGTAAATGAATTAAATAAAAAGATCTATAGATATTATAGATATGTTGGCTCTCTTACTACTCCTCCATGCAAAGAAGGTGTCATTTGGAACGTCATTGACAAGGTTCGGACACTCTCCAAGAAACAACTAGAACTTCTAAAGGCACCATTGGGGGTAGAGTTTCAGCACAACGCAAGGCCTCTTCAGCCATTGAATGGTCGCAAAATTGAGATGTACAACTACCACACATAG 804 0.3993 MALQIYISILSIAALALCTSANHDSVNFSYIGPNGPLKWGTLKQSFAACSNGKAQSPVDLAMTNIVVNNVLKSLDRNYLPTNATLVNHQYSIGVHFEGKVGDININGMNYSLKQLHWHAPAEHRAHGRLHDAELHLVHFTEDNNNIAVVAQLYRLGVPDPLISKIEDKFYKLVNENHAGNKNANIALGTFDVNELNKKIYRYYRYVGSLTTPPCKEGVIWNVIDKVRTLSKKQLELLKAPLGVEFQHNARPLQPLNGRKIEMYNYHT* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2029 267 PANTHER CARBONIC ANHYDRASE 10 265 IPR023561 GO:0004089|GO:0008270
Mtr1g2029 267 Gene3D Alpha carbonic anhydrase 24 266 IPR036398 -
Mtr1g2029 267 SMART Carb_anhydrase_2a 28 264 IPR001148 -
Mtr1g2029 267 CDD alpha_CA_prokaryotic_like 35 262 IPR041891 -
Mtr1g2029 267 ProSiteProfiles Alpha-carbonic anhydrases profile. 26 264 IPR001148 -
Mtr1g2029 267 SUPERFAMILY Carbonic anhydrase 27 260 IPR036398 -
Mtr1g2029 267 PANTHER OS04G0412500 PROTEIN 10 265 - -
Mtr1g2029 267 Pfam Eukaryotic-type carbonic anhydrase 35 262 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2029 Mtr-Chr1 30053995 30058272 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2029 K01674 - gmx:100797401 396.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g2029 1 30053995 30058272 Mtr1g2029 1 30053995 30058272 ECH
Mtr1g2029 1 30053995 30058272 Mtr7g3136 7 48321070 48324405 PCT