Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1897 ATGGAATCTGAAAATGAAGTAGTTATGGAAGACGAGAAACATGTTATTGGGGAAACAACCAAGGTAGAACACATACATAAAGAAGTTGAAGACAATGGTAATGCAGAAATTGAACCCAAGAATGAAGTATCTCAACCCAAAGTAGAAATTGATGGCAACAATTCTGCAGCTACTAAAAACTCCAAAAGTTCCAAGGAACCTGGTGTCAAAAGTGGTGTTGCTCCAAAGAACACTAAATCTACCACCAAAGTTAAACCAAATTTGAAGGGCACAACTTCAGCTCAAACACCGAGACAACAGAACCTTTCAAAGAGCCTTACATTCCCATCGAAATCAGCTCGTCTTGATGCTATGAAGAAAAGCACCGATGGGATTCTTAAGAAGACAGAAAATAAGCACATTCAAGCTGTGACTTCAACTCTTAATTCAAGAAAGTTGACAAACTCAAAGGAGGCAAAAACAAACAATGGAAACTCTAAACAAAGGACTTCTTTGACATCTATAAATAGCTTTAAAAGCTCTGAGTTTGGGAGGTCTACCCCATTGATTGCAGTTGCCAAAAGCCAGACATCCGAGGCATCAATACCTGTTGATCAGAATTCAAACCCTGCAAAAAGTGAAAAGCCAAACAGAGAAGATGACGATGTTAATTCGACAACTTCAAGTCTTACTCCTGGTAAGAAGAGCAACGGCTCTGGATTTTCCTTCAGATTGGAAGAACGAGCTGAAAAGCGAAGAGAGTTCTTCTCAAAGTTAGAAGAGAAAATTCAGGAAAAGGAAGCTGAGATAAGTAATCTGCAAGAGAAATCAAAGGAAAGCCAAGAGGCAGAGATCAAGAAATTAAGAAAGAGAATGACATTCAAAGCAGCTCCAATGCCAAGTTTCTATAAGGAACCTCCTCCAAAAGTTGAGCTGAAAAAGATACCTACGACACGCCCAAAATCACCAAAGCTTGGAAGAAACAAAGGATCTATTGCTAACAACAATTCAGAAGATAAATCCAGTTCTATCCCACATGAGAAACAACAGAAGAATGATTCAACCAAGGCAAAGGTAAAAGGCTATAAAGATGTGAGTTCAAAGAAACCAATCAAAAAAACTCAAGCCAAGGTACAATCTCAGGAAATAACGGTCACAAAAACAGAAATGGATTCTGTCGTGTCTTCCACAAACAAGGTCTCAGTAATCGACCAAGATGCAAAAACAAGTATAGTAGAAGGCAGTGAAGAATGTAAAGATCCAATTGTTAATATTTCTGAATACCAGAATGGGATGGAACAAGAATCACAGAACAGTGTGTTGGTCCTAAATGCTTCCACACCAGAAATCGTACCCTATGAAGTTGCAGTGGGAGTGTAG 1359 0.3885 MESENEVVMEDEKHVIGETTKVEHIHKEVEDNGNAEIEPKNEVSQPKVEIDGNNSAATKNSKSSKEPGVKSGVAPKNTKSTTKVKPNLKGTTSAQTPRQQNLSKSLTFPSKSARLDAMKKSTDGILKKTENKHIQAVTSTLNSRKLTNSKEAKTNNGNSKQRTSLTSINSFKSSEFGRSTPLIAVAKSQTSEASIPVDQNSNPAKSEKPNREDDDVNSTTSSLTPGKKSNGSGFSFRLEERAEKRREFFSKLEEKIQEKEAEISNLQEKSKESQEAEIKKLRKRMTFKAAPMPSFYKEPPPKVELKKIPTTRPKSPKLGRNKGSIANNNSEDKSSSIPHEKQQKNDSTKAKVKGYKDVSSKKPIKKTQAKVQSQEITVTKTEMDSVVSSTNKVSVIDQDAKTSIVEGSEECKDPIVNISEYQNGMEQESQNSVLVLNASTPEIVPYEVAVGV* 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1897 452 MobiDBLite consensus disorder prediction 47 67 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 116 130 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 1 240 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 216 231 - -
Mtr1g1897 452 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) FAMILY PROTEIN 1 452 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 261 284 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 7 45 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 261 367 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 334 364 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 74 110 - -
Mtr1g1897 452 Pfam Targeting protein for Xklp2 (TPX2) domain 234 303 IPR027329 -
Mtr1g1897 452 Coils Coil 249 284 - -
Mtr1g1897 452 MobiDBLite consensus disorder prediction 132 204 - -
Mtr1g1897 452 PANTHER PROTEIN WVD2-LIKE 4 1 452 IPR044833 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1897 Mtr-Chr1 28140375 28144560 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1897 - - gmx:100798810 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3332 7 50483397 50487366 Mtr1g1897 1 28140375 28144560 PCT