Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1883 ATGGATTCGGAAACAGTTCCATCTCCGAGGGATTTGTTGAAATGTTGTGATTGTGGATGTAGTTGTTCCTTGGTGGCTCAATGTTCTGAAAAATGGATGCGTTCTGTTAAGCGAAAGCATGATGAGTTTAAATTGGATAGTGAATTACCTGTGTCCGTTGCGCGGGTTGATATTGTGAACGAATGTGTTGTTTTACGTGAGATGGTTAGTATGCAGCAGAGAACGATTCAGGATTTGAATGAGGAGTTGGAGGAAGAGAGAAATTCTGCGTCCACAGCTGCGAATGAGGCAATGTCGATGATTTTGAGGTTGCAGAGGGAAAAGGCGGAAGTTCAAATGGAAGCTCGTCAGTTTAAGCGTTTTGCAGAGGAGAAAATGACGCATGATCAGGAGGAACTTATGTCTTTGGAAGATTTGTTGTACAAGAGAGAGCAGATAATTCAGTCGCTTACATGCGAAGTTCAGGCTTATAAACACAGGATGATGAGTTTTGGGTACACCGAGGATGAGGTCGAAGGTGATCAATATGATGATATTCCTCCATACGAATACCCTCCCTTAAAATGTAATGTCTTGTATAATGGCATGGATGTTGATAATGACGACACTGATATTGAGAAATATGCATTTGGGGAAACTCCTGATGACCGTTTGAGGAGCTTGGAGAATAGGATTTCTCAAATGGAGAAAACTCCCACTTACAGCCAGGTGGATGGTGATTTTATTGGAAAAAATGTTTCGGAGAAAGTAATTGTTGGACAATCTCCAAATTTGACAAGCCACGCGAGGAAATTTTCCTCTGACTCAGCAACGTTCGGTGGGATGTGTAAAGAAATAGGTTCCGAGTTCCCTACGGAGTCTCCCAAGAACAATAACAAGTATAAGAAGGATTATTTCTCTCAACCAGAGGACAATTCAAATTTGAAGAAGGTAGATAATGCATCAGAAGGTGATGATACGAGTGACAGAATTTATACAATTGACTCTGTTCATTCTGGGGCACCGGATAATGGCTTTACAGGTTCCAAAGGTGGAGTTTTCGATGATTATGCAACCAGTCCAAAGGAATCAGGGAATCATCATGCTGATTTCGAAGATCCCTACATTAAGAAGCTTTACATGAGGCTTCAGGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCAATGAGCACAGATAAAGCACAGGTTGTGTTACTGAAGGAAATAGCTCAGCATTTGTGCAAAGAGATGTCACCGCAAAGAAAAATAAGTACGAGCAAGCCTGCAAGATCTCGGTACTTGTCAATTTTTAAGTGGATCACATCAATTGTTTTTTGGAGAAACAAAGCTCACCAAAGCAAGTATATGTTTGGGCTACCAACTGACAGTATGGGCTTGCTACTGCTCCTTGACAAAAGAACAAATGCAAGGCCACAGAGATGTATTTCAAGTACACAACTGGGAGATTAA 1461 0.4141 MDSETVPSPRDLLKCCDCGCSCSLVAQCSEKWMRSVKRKHDEFKLDSELPVSVARVDIVNECVVLREMVSMQQRTIQDLNEELEEERNSASTAANEAMSMILRLQREKAEVQMEARQFKRFAEEKMTHDQEELMSLEDLLYKREQIIQSLTCEVQAYKHRMMSFGYTEDEVEGDQYDDIPPYEYPPLKCNVLYNGMDVDNDDTDIEKYAFGETPDDRLRSLENRISQMEKTPTYSQVDGDFIGKNVSEKVIVGQSPNLTSHARKFSSDSATFGGMCKEIGSEFPTESPKNNNKYKKDYFSQPEDNSNLKKVDNASEGDDTSDRIYTIDSVHSGAPDNGFTGSKGGVFDDYATSPKESGNHHADFEDPYIKKLYMRLQALEADRESMRQAIISMSTDKAQVVLLKEIAQHLCKEMSPQRKISTSKPARSRYLSIFKWITSIVFWRNKAHQSKYMFGLPTDSMGLLLLLDKRTNARPQRCISSTQLGD* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1883 486 Coils Coil 369 389 - -
Mtr1g1883 486 Coils Coil 69 114 - -
Mtr1g1883 486 MobiDBLite consensus disorder prediction 289 321 - -
Mtr1g1883 486 PANTHER ZEIN-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 13 461 - -
Mtr1g1883 486 ProSiteProfiles GTD-binding domain profile. 60 158 IPR007656 -
Mtr1g1883 486 PANTHER BNAANNG28530D PROTEIN 13 461 - -
Mtr1g1883 486 Pfam Zein-binding 65 154 IPR007656 -
Mtr1g1883 486 Coils Coil 119 139 - -
Mtr1g1883 486 MobiDBLite consensus disorder prediction 281 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1883 Mtr-Chr1 27904413 27910672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1883 - - gmx:100806435 760.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1883 1 27904413 27910672 Mtr1g1883 1 27904413 27910672 ECH
Mtr7g3345 7 50601505 50604732 Mtr1g1883 1 27904413 27910672 PCT