Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1838 ATGCCAGGATTACCCCAATTCAGTAATGGATTTTGGTCTAAGAATCGTGATGATGTTGTTGGATATAATCAGCTTCACAAATTCTGGAGTGAGCTGTCGCCACAAGCTCGGCAGGAACTCTTGAGGATAGACAAGCAAATGCTTTTTGAGCAAGCACGGAAAAATATGTACTGCTCTAGATGCAATGGATTGCTTCTTGAAGGATTTTTGCAGATTGTTATGTATGGAAAGTCTTTGCAGCCAGAAGGAGCAGGTGTTCAGTTTCCTTGTGGAAGACCTGGGGGTTTCAAAAATCAAAATAATGGTGGATCGTCCACTTCCAATGGGGTCCGGAATGAAATTCAGGATCCATCAGTTCATCCGTGGGGAGGTTTGACGACAACGCGTGAGGGTTCATTGACACTTATGGACTGCTACTTGTATTCAAAGTCTCTGAAAGGACTGCAAATTGTATTTGATGGCGCACGTGCTAGGGAGCGGGAAAGGGAACTGCTTTATCCCGATGCCTGTGGTGGAGGAGGCCGTGGTTGGATAAGCCAAGGAATAGTGAGTTATGGTAGAGGGCATGGAACAAGGGAAACCTGTGCCCTGCATACTGCCAGACTTTCGTGTGATACACTGGTTGATTTTTGGTCCGCACTGGGTGAGGAGACAAGACAATCTCTTCTAAGGATGAAGGAAGAAGATTTTATTGAGAGACTCATGTATAGGTTTGATAGCAAGAGGTTTTGCAGAGATTGTAGAAGAAATGTTATTCGAGAATTCAAGGAACTAAAAGAATTGAAGCGCATGCGTAGAGAACCTCGTTGCACCAGCTGGTTTTGTGTTGCTGATACTGCCTTTCAGTATGAGGTATCTGATGACTCGATTCAAGCTGATTGGCGCCAAACATTTGCTGATACTGTGGGATTGTATCATCACTTTGAGTGGGCTGTGGGGACAAATGAAGGAAAATCAGACATTTTGGAATTTGAAAATGTTGGAACAAATGGATGTGTCCAAGTCAGTGGCCTAGATCTTGGTGGTTTGAGTGCATGCTTCATTACCCTCCGAGCTTGGAAATTAGATGGCCGGTGTACTGAATTTTGTGTTAAAGCTCATGCATTAAAGGGTCAAGAGTGCGTACATTGCAGGCTAATTGTTGGGGATGGTTATGTTACAATCACAAAAGGAGAAAGCATAAAAAGATTCTTTGAGCATGCTGAAGAGGCAGAAGAAGAAGAGGATGATGATTTGATGGACAAAGACGGGAATGAGCTTGATGGAGAATGCACCCGTCCGCAAAAGCATGCGAAGAGCCCTGAACTTGCTCGAGAATTTCTTCTAGATGCTGCTACGGTTATATTCAAAGAGCAGGTAGAAAAAGCTTTCAGAGAGGGAACAGCACGTCAAAATGCGCACAGCATATTCGTTTGTCTTGCTCTAAAACTGCTGGAGGAACGAGTTCATGTAGCATGCAAAGAGATCATTACATTAGAAAAACAGACCAAACTTCTTGAGGAAGAAGAAAAGGAAAAACGTGAAGAAGAAGAGCGCAAGGAGAGGAAAAGAGCAAAAGAAAGGGAGAAAAAGCTTAGAAGAAAGGAAAGACTAAAAGGAAAGGATAAAAATAAAGAAGGAAAGTTTTCTGAGTCAAATGATGTTCCTAGCTCCCCTGAAGCCGTAAAGGAAGAACTGTCTGCACCCGCTGATACAGAGCAAAATAACGCCCTTTCATGCAAGAATTCAGTTGTTGCAACAGATGAGCCTAATTTATCAAATGGCGATTATCATGACATCCAAGATGAAGAGTTCTCAAGTGAGTGTAGTACTCTCAGAGCGCAAGACTGTGCTTATGATGACTATGATGGAGATATTGCATATGAACATGACAGGAATGGTACTAACAAAGTTGAACAACCAAAGTTTTATCGTCAAAGACTTAGATATAGGAAAGAGTTTCAAGTCGACATGTCTTCAAAGTGGTCTGACAGGTACCATAATTCAGCTGTTTCAGAAAATGGAGGAGGGATGGTAGGAAGATCTGAGCCAAGACACTATGGAGATAATTTCGGAACATCTTCCAGAGGAATCAGTGGATTGAACAGACAATCAAAAGTAAATGTTCCAAAAATCAATGGTCGAAATGTTGGTCATAATTGTAATGAGAAGTTCTATAGTTCCAACTACCGGATGAGTGAAAAATATGATTTCCATTCTTGCAGTTGTAGCCCAAACAGTAGAGTGACGAGAGGTAGTCGGGAGATTAAAGCCGTCAGTAAGTCTGAAACTGCAGTCGATACATCTAGGCAGTTTTACCGTGGTAGCAAGTATAATCAGGTAGACATGCATGAGAGTAGTGGAAGACCCAAAAGCAGAGTCTTCTCAGGCAACTATCCAAGTAGGGATATGCTTCAATCAAAGAAAGTTTGGGAGCCTACAGAATCACTCAATAAATATGCTCGTAGTAATTCAGACTCTGATGTTACGTTGAGGTCCACAGGTCAAGTATCTCAGTTTGATCCGGTCAGGTCGCCTGTTGATGAAGTTGATGATTCAGGTGAAATTGACAATGATAGTGATTTGAAGAGACATGGATTGACCGAAGGCTGTCAGAATGATCTTGATGCAGAAGCTGAAGGATCTTGCAGCTCCACAGAAATTGGATCTGAGGAACCTGAAATAAGTGTGACGAGGCTATCTGCCATGAATAATTCTTCTGATCACAGTCAAGGTAGCATTTCTAGTTCTGATAACTGTTCGTCATGCTTAAGCGAGGGCGATAATAATACAACCTCTTCAAACCGTGAAAATACAGAATTCTCAAATTCAGATTCAGAAGATGCTAGCCAAAAATACGAAGTAACAGATAGTTCAACCTGCGTTGACAATGGCGTGTCTGACTGTTGTGAACCTGGGATCGACAAAACTCATATTGCAAATGGTGAGGGTCTGTCAAGCAGGTCACTATCTGTTCCATCATTGGATGTAGTAGAAAGTGAAGTGTTTGTGAATCCTGTATTAGAAACTGCCCAAAATTTTGAAAATAGTTTTTCTTCCCCCAATGTTTGTTCTCAACCTGAAAGCATTCTTCCTCCAATGCCAAACCGAAACATACAATTTCCTGTGTTTCAGACTCCTTCGGCAATGGGTTACTACCATCAAAATCAAGTTTCATGGCCAACCGCTCCCGCAAATGGTTTGATGCCCTTTGTACACCCAAATAACTATTTATATGCTGGCCCTCTTGGATATAACTTAAATGAGGACCCGCGCTTCTGCTTGCAGTATGGTGCCTTGCAACAACCAACACCTCAATTTAACCCTGCAGCTATTCCAGTTTATCATCCAGTTGCCAGAGGTAAGGGCTTAAATGGAGAAGAGCTGAGTCAAATTTCTATTCCAGCATCCATGCAAGATCATTTCAATGAATCCGTTGCAGAAAGGGTTGTTCCAGCTGCAGCTAATTCCAGAAAAGCAGGACTGAATGGGGAAGACCGACTCAGTAATTCTGCCAAGTCACAAGAGAGTAACGGTGGTTTTTCCTTGTTTCATTTTGGCGGGCCTGTAGCCTTTTCAAATGAACGCAAAACAGCTACTGCATCTTCCGACAATGTTGGAGATTTTAACTCAAAAAGTTTGCATGATCAAGTCGAAAAAGATCATGGTTGCAATAAGAAAGAGACTGCTTTCATAGAGGAGTACAACTTGTTTGCGGCAAGTAATACCTTAAGGTTCACAATTTTCTAA 3729 0.4205 MPGLPQFSNGFWSKNRDDVVGYNQLHKFWSELSPQARQELLRIDKQMLFEQARKNMYCSRCNGLLLEGFLQIVMYGKSLQPEGAGVQFPCGRPGGFKNQNNGGSSTSNGVRNEIQDPSVHPWGGLTTTREGSLTLMDCYLYSKSLKGLQIVFDGARARERERELLYPDACGGGGRGWISQGIVSYGRGHGTRETCALHTARLSCDTLVDFWSALGEETRQSLLRMKEEDFIERLMYRFDSKRFCRDCRRNVIREFKELKELKRMRREPRCTSWFCVADTAFQYEVSDDSIQADWRQTFADTVGLYHHFEWAVGTNEGKSDILEFENVGTNGCVQVSGLDLGGLSACFITLRAWKLDGRCTEFCVKAHALKGQECVHCRLIVGDGYVTITKGESIKRFFEHAEEAEEEEDDDLMDKDGNELDGECTRPQKHAKSPELAREFLLDAATVIFKEQVEKAFREGTARQNAHSIFVCLALKLLEERVHVACKEIITLEKQTKLLEEEEKEKREEEERKERKRAKEREKKLRRKERLKGKDKNKEGKFSESNDVPSSPEAVKEELSAPADTEQNNALSCKNSVVATDEPNLSNGDYHDIQDEEFSSECSTLRAQDCAYDDYDGDIAYEHDRNGTNKVEQPKFYRQRLRYRKEFQVDMSSKWSDRYHNSAVSENGGGMVGRSEPRHYGDNFGTSSRGISGLNRQSKVNVPKINGRNVGHNCNEKFYSSNYRMSEKYDFHSCSCSPNSRVTRGSREIKAVSKSETAVDTSRQFYRGSKYNQVDMHESSGRPKSRVFSGNYPSRDMLQSKKVWEPTESLNKYARSNSDSDVTLRSTGQVSQFDPVRSPVDEVDDSGEIDNDSDLKRHGLTEGCQNDLDAEAEGSCSSTEIGSEEPEISVTRLSAMNNSSDHSQGSISSSDNCSSCLSEGDNNTTSSNRENTEFSNSDSEDASQKYEVTDSSTCVDNGVSDCCEPGIDKTHIANGEGLSSRSLSVPSLDVVESEVFVNPVLETAQNFENSFSSPNVCSQPESILPPMPNRNIQFPVFQTPSAMGYYHQNQVSWPTAPANGLMPFVHPNNYLYAGPLGYNLNEDPRFCLQYGALQQPTPQFNPAAIPVYHPVARGKGLNGEELSQISIPASMQDHFNESVAERVVPAAANSRKAGLNGEDRLSNSAKSQESNGGFSLFHFGGPVAFSNERKTATASSDNVGDFNSKSLHDQVEKDHGCNKKETAFIEEYNLFAASNTLRFTIF* 1243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1838 1242 PANTHER OS10G0105400 PROTEIN 8 1242 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 681 696 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 97 114 - -
Mtr1g1838 1242 Coils Coil 475 528 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 838 864 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 815 952 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 665 696 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 815 834 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 871 952 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 562 583 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 501 592 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 501 518 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 774 793 - -
Mtr1g1838 1242 PANTHER - 8 1242 - -
Mtr1g1838 1242 MobiDBLite consensus disorder prediction 94 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1838 Mtr-Chr1 27219252 27226343 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1838 - - gmx:100776127 1746.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1838 1 27219252 27226343 Mtr1g1838 1 27219252 27226343 ECH
Mtr7g2743 7 44081732 44089645 Mtr1g1838 1 27219252 27226343 PCT