Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1834 ATGGCTGAATCAACCAAACATGTTACACACTTAAACATCAAAAGCTTCTCTTCTGTTCTCAAAACCAGAAAAACAATCGCTTTTACTTATGCTTTTATGCTTGCTTTTGTTTCTTTAACTGTTTTCTTAGCTTTTTCTCCTTCTTCTAATGCTTCTTCTCCTTGGTTTACTAACATATTCACTACAAAAACTTCCACTTTTGATTCTTCTATTTTCTCATTCTTTTTCCACAACACAACCACTTCATCTTCCACTTTTAGCAACACTTTTGGTAACACTTCTAGATCTAATAGTAACACTTTTCAATCTTCTAAATCAAATACAACAACTTTCAAAGCAACCCATGTTGGAAACAAAACTCAAAACTCTCTCAATACATCTAAAGATGCTGTTTCAACCACCAACCAAACCTCTTCTCATGTTTCTGATGAATTTAAGCATCAGAAGAAGATGAATCAAACTGCAAGTATGAAAGATGAGATTCATATGATGGAGTCTTTGATGAAGTGTGATTTTTTTGATGGGAAATGGATTAAAGATGAATCTTATCCTCTCTATAAACCTGGTTCTTGCAATTTGATTGATGAACAATTCAGTTGTATAAACAATGGAAGGCCTGATAAAGATTATCAGAAATTAAAGTGGAAACCAAAAGGGTGTAGTCTTCCAAGGTTGGATGGACACAAAATGTTGGATTTGTTGAGAGGCAAGAGACTTGTTTTTGTTGGTGATTCAATCAATAGGAATATGTGGGAATCTCTTATTTGCATCCTTAGAAACTCTGTGAAAGATAAAAGTAAAGTTTTTGAAGCAAATGGAAGAGTACATTTTAAAGGAGAATCCTCTTATTCATTCATATTCAAGGATTACAACTTCTCTGTCGAGCTTTTTGTATCGCCGTTCTTAGTTCAGGAGTGGGAAATGCTTGTCAAGAATGGAACAAAGAAGGAAACACTTCGGCTCGATTTGGTTGGTAGATCTTCTAATCAATATAAAGATGCAGATATAATCATCTTCAACACTGGCCATTGGTGGACTCATGATAAAACTTCTAAAGGCAAGGACTATTACCAAGAAGGTAGTCATGTGTATAATGAATTGAATGTTTTGGAGGCATTTCGAAAGGCTATAACAACCTGGAGCAGATGGGTTGATGCCAACATAAATACATCCAAGTCTATGGTCTTCTTCAGAGGCTATTCTTCTTCTCACTTTAGTGGCGGGCAATGGAATTCAGGTGGACAATGTAACAGTGAAATCGTGCCAATCAAGAACGAAAAATACTTGAGGCAATACCCTCCTAAGATGAGAGTTTTGGAAAAGGTACTAAGGAATATGAAGACTCGTGTGACCTACTTAAATGTCACGAAAATGACAGATTTCCGAAAAGACGGTCATCCCTCTATCTATAGGAAGCAAAACCTATCACCAGACGAAAGGAAATCGCCGTTGATGTACCAAGACTGCAGCCATTGGTGCCTCCCTGGCGTTCCTGATACATGGAATGAGATACTCTATGCGGAGCTTTTAATGAAACAGTATCAATATCGAAATCAAAATCAAAATCAAAATCAGCATTGA 1581 0.3631 MAESTKHVTHLNIKSFSSVLKTRKTIAFTYAFMLAFVSLTVFLAFSPSSNASSPWFTNIFTTKTSTFDSSIFSFFFHNTTTSSSTFSNTFGNTSRSNSNTFQSSKSNTTTFKATHVGNKTQNSLNTSKDAVSTTNQTSSHVSDEFKHQKKMNQTASMKDEIHMMESLMKCDFFDGKWIKDESYPLYKPGSCNLIDEQFSCINNGRPDKDYQKLKWKPKGCSLPRLDGHKMLDLLRGKRLVFVGDSINRNMWESLICILRNSVKDKSKVFEANGRVHFKGESSYSFIFKDYNFSVELFVSPFLVQEWEMLVKNGTKKETLRLDLVGRSSNQYKDADIIIFNTGHWWTHDKTSKGKDYYQEGSHVYNELNVLEAFRKAITTWSRWVDANINTSKSMVFFRGYSSSHFSGGQWNSGGQCNSEIVPIKNEKYLRQYPPKMRVLEKVLRNMKTRVTYLNVTKMTDFRKDGHPSIYRKQNLSPDERKSPLMYQDCSHWCLPGVPDTWNEILYAELLMKQYQYRNQNQNQNQH* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1834 526 Pfam PMR5 N terminal Domain 169 220 IPR025846 -
Mtr1g1834 526 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 222 507 IPR026057 GO:0016740
Mtr1g1834 526 MobiDBLite consensus disorder prediction 122 141 - -
Mtr1g1834 526 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 144 517 - -
Mtr1g1834 526 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 14 82 - -
Mtr1g1834 526 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 14 82 IPR029962 GO:0016413
Mtr1g1834 526 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 144 517 IPR029962 GO:0016413
Mtr1g1834 526 MobiDBLite consensus disorder prediction 122 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1834 Mtr-Chr1 27130125 27133382 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1834 - - cam:101512080 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1834 1 27130125 27133382 Mtr1g1834 1 27130125 27133382 ECH
Mtr7g2734 7 44011532 44015901 Mtr1g1834 1 27130125 27133382 PCT