Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1809 ATGGGAGCAGGTGGTAGAGCCTCTAATCCTCCATCACAAAGGAAAATAGAGAATGATGAACATTTGAAGAGGGTTCCAACTACAAAACCACCATTCACTCTTGGTGAAGTCAAGAAAGCAATTCCACCACATTGTTTTCACCGTTCATTGATTAGATCATTTTCCTATGTCATTGTTGACCTTACCATAGCATCAATCCTTGCCTATATAGCCACAAATTACTTTCCTACCCTTCCACATAACCTCTCATTTTTGGCGTGGCCCGTTTATTGGGCCATCCAAGGATGCATTCTAACCGGAGTTTGGGTCATTGCACATGAATGTGGCCATCATGCATTTAGTAATTATCAATGGGTCGACGATTTAGTTGGCCTTGTCCTTCATTCTTGCCTCTTGGTACCTTATTTTTCGTGGAAATATAGTCATCGCCGCCACCACTCTAACACAGGTTCTCTCGAACGCGATGAGGTTTTTGTTCCTAAGAAAAAATCTCAAATTGGTTGGTATTTTAAATACCTTGACAACCCACTTGGAAGATTTCTGACACTCACTATAACACTCACTCTTGGTTGGCCCCTTTACTTAGCCTTCAATGTTTCGGGTCGGCCCTACGATAGGTTCGCCTCACATTACGACCCATATGGGCCCATTTATTCCGATCGTGAAAGACTTCAAATTTATGTTTCAGATGTCGGGGTTCTCGCAGTTTCTTATGGGCTTTACCGTCTTGTTTTGGCCCAAGGTTTGAATTGGGTTATTTGTGTTTATGGAATTCCACTTCTTATTGTGAATGGATTTTTGGTTTTGATTACTTACTTGCAACACACTCACCCTGCTTTGCCTCATTATGATTCTACTGAATGGGATTGGATGAGAGGTGCTTTGGCAACTGTGGATAGAGATTATGGAATTCTTAATAAAGTTTTTCATAACATAACTGATACTCATGTGGTTCATCATATGTTTTCAACTATGCCTCATTATCATGCAATGGAAGCTACCAAAGGTGTGAAACCTATTTTGGGTGAATATTATCATTTTGATGGGACTCCTATTTACAAAGCTATGTGGAGAGAGGCTAAGGAGTGTCTTTATGTTGAGGCTGATGAAGGTAGTGAGGTTAAAGGTGTTTATTGGTACAAAAATAAATTTTAA 1155 0.4009 MGAGGRASNPPSQRKIENDEHLKRVPTTKPPFTLGEVKKAIPPHCFHRSLIRSFSYVIVDLTIASILAYIATNYFPTLPHNLSFLAWPVYWAIQGCILTGVWVIAHECGHHAFSNYQWVDDLVGLVLHSCLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKKKSQIGWYFKYLDNPLGRFLTLTITLTLGWPLYLAFNVSGRPYDRFASHYDPYGPIYSDRERLQIYVSDVGVLAVSYGLYRLVLAQGLNWVICVYGIPLLIVNGFLVLITYLQHTHPALPHYDSTEWDWMRGALATVDRDYGILNKVFHNITDTHVVHHMFSTMPHYHAMEATKGVKPILGEYYHFDGTPIYKAMWREAKECLYVEADEGSEVKGVYWYKNKF* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1809 384 PANTHER OLEATE HYDROXYLASE FAH12 1 384 - -
Mtr1g1809 384 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 384 - -
Mtr1g1809 384 Pfam Fatty acid desaturase 86 346 IPR005804 GO:0006629
Mtr1g1809 384 CDD Delta12-FADS-like 48 330 - -
Mtr1g1809 384 Pfam Domain of unknown function (DUF3474) 19 68 IPR021863 GO:0016717
Mtr1g1809 384 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1809 Mtr-Chr1 26729094 26732386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1809 1 384 Lipid Metabolism Gene Families AT3G12120 74.219 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1809 K10256 - ming:122061917 676.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1809 1 26729094 26732386 Mtr1g1809 1 26729094 26732386 ECH
Mtr7g2720 7 43876900 43882212 Mtr1g1809 1 26729094 26732386 PCT