Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1727 ATGCCAATTTCACCGGCAGCTGTGATCATCCCATTGGGTATTCTCTTCTTCGCTTCTGGTCTCATCGTTAACATCATTCAGGCAACATGCTTTGTGATTTTGAGACCCTTTTCAAAGAATTTGTACAGACGGATCAACAGAATGGTGGCAGAACTTCTTTGGCTCGAGCTTGTTTGGATTTTTGATTGGTGGGCTGGTGTCAAGATCCAATTATTCACAGATCCCGAAACCTTTCGTTTCATGGGTACGGAGCATGCTCTTGTCATATCCAATCACAGAAGTGACATTGATTGGCTTGTTGGATGGATTTTAGCTCAGCGTTCAGGATGCCTTGGTAGCACGCTTGCTGTGATGAAGAAATCATCTAAGTTTCTGCCGGTCATTGGGTGGTCAATGTGGTTTTCTGAATATCTTTTCTTGGAGAGAAATTGGGCCAAGGATGAAAGAACATTAAAGTCAGGCCTACAGCAACTGCGGGATTTCCCTCTTCCCTTTTGGCTAGCTCTCTTTGTAGAAGGAACTCGCTTTACACAGGCCAAATTATTAGCCGCTCAGGAATATGCAACCTCAACTGGATTGCCTGTTCCTAGAAACGTTTTGATTCCAAGAACTAAGGGGTTTGTTTCTGCAGTAAGTCATATGCGCTCATTTGTTCCAGCCATTTATGATGTAACAGTGGCAATTCCCAAGAGTTCACCCCCTCCTACAATGCTAAGACTCTTCACAGGGCAATCTTCGGTGGTTCATGTGCATATTAAACGGCATTTGATGAAGGATTTGCCAGAAGCAGAGGAAGCTGTTGCTCAATGGTGTAGAGACATATTTGTGGCTAAGGATGCTTTGTTAGACAAACATACTGCTGATGACAAATTCAGTGATCACGAGCCACGGGATCTTGGTCGACCAATAAAGTCTCTTCTGGTTGTCATAACATGGATTTGTGTCGTCGTTGCGGGGACTGTTAAGTTGCTTCAATGGTCTTCACTACTATCCTCTTGGAAGGGTGTTGCATTTTCAGTATTTAGTTTGGCAATTGTCACCGCACTCATGCAATTCTTGATTAAGTTCTCACAATCCGAGCGTTCAAACCCTGCCAAGGTATCCCCTTCAAAGTCCAAAAGTAGAGAAGAATTGCAGGCTAGTGATGACAAACAAGAGTAG 1161 0.4376 MPISPAAVIIPLGILFFASGLIVNIIQATCFVILRPFSKNLYRRINRMVAELLWLELVWIFDWWAGVKIQLFTDPETFRFMGTEHALVISNHRSDIDWLVGWILAQRSGCLGSTLAVMKKSSKFLPVIGWSMWFSEYLFLERNWAKDERTLKSGLQQLRDFPLPFWLALFVEGTRFTQAKLLAAQEYATSTGLPVPRNVLIPRTKGFVSAVSHMRSFVPAIYDVTVAIPKSSPPPTMLRLFTGQSSVVHVHIKRHLMKDLPEAEEAVAQWCRDIFVAKDALLDKHTADDKFSDHEPRDLGRPIKSLLVVITWICVVVAGTVKLLQWSSLLSSWKGVAFSVFSLAIVTALMQFLIKFSQSERSNPAKVSPSKSKSREELQASDDKQE* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1727 386 CDD LPLAT_LCLAT1-like 58 253 - -
Mtr1g1727 386 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 7 376 - -
Mtr1g1727 386 MobiDBLite consensus disorder prediction 359 386 - -
Mtr1g1727 386 MobiDBLite consensus disorder prediction 370 386 - -
Mtr1g1727 386 Pfam Acyltransferase C-terminus 239 312 IPR032098 -
Mtr1g1727 386 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 59 289 - -
Mtr1g1727 386 Pfam Acyltransferase 83 228 IPR002123 GO:0016746
Mtr1g1727 386 SMART plsc_2 86 208 IPR002123 GO:0016746
Mtr1g1727 386 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-LIKE PROTEIN 7 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1727 Mtr-Chr1 23739454 23748924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1727 6 385 Miscellaneous Gene Families AT3G57650 73.421 0.0 590
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1727 K13523 - gmx:100814107 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1727 1 23739454 23748924 Mtr1g1727 1 23739454 23748924 ECH
Mtr7g2671 7 43417403 43423478 Mtr1g1727 1 23739454 23748924 PCT