Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1717 ATGTTGAATGATCAAAGAGCTTCAACAAGCCATGGCAGAGAACAGAATGATGATTATGATCAAGAAGATGAAGAAATTATAAGAGAAATTCATGCCTTAACCCCACCTCACTCTCAAAGAAGACAATCACAACACAGTCACCAATCATCTCTATTTTCCATAGCTAATGAGAATTTCACAAGTATAAGTAGAGAATTCAGTGCTTTGGTTCAAGCAGGTTCAAGTATTGACCATAACAACTTAAGTCCAATGATGACTAGTACTACTAGTAATACTAATAGCAATGAAAGAGAAAGCAACAATAATATTAGAAGCTTTCACAACTTGTTGAGGATTAGAGAAAATGAATTGATGGAAGAAACTAACCCTTTGGCAATTGTGGCTGATAACAACCCTTTGGAGCTGCATCCATCATCATCATCATCTTCTTCAAGCACCATCAATGGTCATCATCAGAGTGAAGTGTCAGTTCAGAGGGTGAAGAAAGAAGAGGTTGAGTCCAAGATAGCTGCATGGCAAAACGCTAAGGTTGCTAAGGTTAATAACAGGTTTAAAAGGGAAGATGCTGTTATCAATGGTTGGGAGAATGAGCAGGTTCAGAAAGCTAATTCATGGATGATGAAAGTTGAGAGGAAGCTGGAGGAGAAAAGAGCAAAAGCATTGGAGAAAATGCAAAATGATGTAGCAAAAGCTCATAGAAAAGCACAAGAAAAGAGAGCATCTGCAGAGGCTAAAAGAGGAACTAAAATTTCAAGGGTTCTTGAGATTGCCAACCTTATGAGAGTTGTTGGAAGAGCTCCTTCCAAAAGATCCTTCTTTTAA 822 0.3796 MLNDQRASTSHGREQNDDYDQEDEEIIREIHALTPPHSQRRQSQHSHQSSLFSIANENFTSISREFSALVQAGSSIDHNNLSPMMTSTTSNTNSNERESNNNIRSFHNLLRIRENELMEETNPLAIVADNNPLELHPSSSSSSSSTINGHHQSEVSVQRVKKEEVESKIAAWQNAKVAKVNNRFKREDAVINGWENEQVQKANSWMMKVERKLEEKRAKALEKMQNDVAKAHRKAQEKRASAEAKRGTKISRVLEIANLMRVVGRAPSKRSFF* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1717 273 MobiDBLite consensus disorder prediction 1 25 - -
Mtr1g1717 273 PANTHER OS02G0116800 PROTEIN 5 272 - -
Mtr1g1717 273 Coils Coil 206 241 - -
Mtr1g1717 273 PANTHER CARBOXY-TERMINAL REGION REMORIN 5 272 - -
Mtr1g1717 273 MobiDBLite consensus disorder prediction 79 100 - -
Mtr1g1717 273 MobiDBLite consensus disorder prediction 131 159 - -
Mtr1g1717 273 Pfam Remorin, C-terminal region 164 269 IPR005516 -
Mtr1g1717 273 MobiDBLite consensus disorder prediction 133 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1717 Mtr-Chr1 23479986 23482640 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1717 - - gmx:100802874 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1717 1 23479986 23482640 Mtr1g1717 1 23479986 23482640 ECH
Mtr7g2656 7 43266948 43269806 Mtr1g1717 1 23479986 23482640 PCT