Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1713 ATGCTAAGGACAACAACAACATCAATATCAATAGCTTCAGAACAATATTCTACCGGGTGGATAAAGATTCCTCCTTCATGTGTGCCACCACATCGGAATCACTCTAATTCCAGCATAACCTTTAGTACCTATTATCACCATTATAAGTCCCTAGTGGTGAAGTGTTCCAACATGACGGTGACACCTAAGATTTCGGTTAACGATGGGAATTTGATGGTTCATGGGAAGACAATACTGAGTGGAGTTCCAGATAACATTGTGGTAACTCAAGGAAGTGGAAAGGGCATTGTGACTGGTGCTTTTCTTGGTGCAACTGCTTCAAACATCAAAAGTCTCCATGTCTTTCCCATCGGTGTTTTACAGGATCTCCGATTCTTGTGTTGTTTCCGGTTCAAGTTATGGTGGATGACTCATAGAGTGGGAACTTGTGGGAGGGATATCCCTTTGGAGACCCAATTCATGCTTATAGAGATCAAAGAAAGTAAAAATTCTCCAGTCATTTACACTGTCTTACTTCCTCTACTGGAAGGTCAATTCCGTGCGGTCCTACAAGGCAATGACAAAAATGAGATAGAAATTTGCCTTGAAAGTGGAGATCCGACTGTTGAGACCAATCAAGGCCGTCACATAGTCTACATGCATGCTGGGACCGACCCATTTGAAGTCATCAACCAAGCTGTTAAGGCTGTTGAAAAACATATGCAAACTTTCCTTCATCGTGAGAAAAAAAGATTGCCGTCTTTTCTTGACTGGTTTGGCTGGTGCACGTGGGATGCTTTCTATACTGATGTCACAGCTGAGGGTATTGAGGATGGCTTGAAAAGCTTATCAGAGGGAGGCGCATCTCCACGGTTCCTCATCATAGATGATGGCTGGCAACAGATTGAGAGTAAACCAAAAGACACTGACTGTTCTGTACAAGAAGGAGCACAGTTTGCTACTAGGTTGACTGGTATTAAAGAGAACACTAAATTTCAAAAAGATGGAGAGAGCAATGGTCTGAGGCATGTTGTGGACCAAACAAAGCAACGTCACAATGTGAAATATGTTTATGTTTGGCATGCTCTAGCTGGTTACTGGGGTGGAGTGAAGCCGGCAGCAATTGGAATGGAACATTATGATACTTCCTTGGCATACCCGATCCATTCTCCGGGGGTCCTAGGAAACCAACCAGACGTTGTCATGGACAGCTTGGCTGTCCATGGCTTAGGTCTGGTTCATCCGAAGAAGGTTTTTGATTTCTACAACGAGCTCCATGCTTACTTAGCTTCGTGTGGAGTAGATGGAGTGAAGGTCGATGTGCAAAATATCATCGAGACTCTAGGTTCAGGACATGGTGGAAGAGTCTCAATCACACGTAGCTATCATCAAGCACTTGAGACCTCTATTGCTCGAAATTTTCGCGACAATGGATGTATTGCCTGCATGTGTCACAATACTGATGGCCTTTATAGTGCCAAGCAGACTGCTGTTGTGAGAGCCTCTGATGACTTTTACCCACATGATCCTGCTTCTCACACTATTCATGTTTCGTCAGTTGCATATAACTCAATTTTCCTTGGAGAATTCATGCAACCTGACTGGGACATGTTTCATAGTTTACATCCAGCAGCCGAGTATCATGCTGCAGCTCGTGCAATCAGTGGAGGTCCTATTTATGTCAGTGATAAACCAGGAATGCACAATTTCGATCTTCTAAAGAAATTGGTTCTTCCTGATGGCTCGGTTCTCCGTGCTCAGTTACCAGCCCGGCCCACTCTTGACTCTCTATTTGTTGATCCAGCAAGAGATGGAACTAGCTTGCTTAAGATATGGAATTTGAACAAATGTTGTGGAGTAGTTGGTGTATTTAACTGCCAAGGTGCTGGGTGGTGCAAGATAGAGAAGAAAAACCGTATTCATTGTGAAACCCCTGGGACACTTAGTGGCTCTATTTGTACCTCTGATGTTGACCTCATTGCTCAAGTTGCTGGTGCTGATTGGAACGGGGATGCTATTGTCTATGCTTACAGATCAGGTGACATAATTCGGCTACCAAAAGGTGCTTCATTGCCAGTGACTCTTAAAGTTTTAGAGTATGAGCTTCTTCATTTCTATCCACTCAAGGAAATCGCGCAAGGTATTTCATTTGCACCAATAGGGCTATTGGACATGTTCAACACCGGAGGAGCTGTAGAACATTTTGAAATCCATAAAGGAGCGACAGCATCTGCCAGCCTGAGAGTTAGGGGAAGTGGAAGATTTGGGGTTTACTCCTCTCAGAAGCCAGTGAAGTGTGTGGTGGGCGACAATGAAACTGACTTCAACTACGAGTCGGAGACTGGGTTGTTAACTTTCTACATGCCAGTTTCAGTTGAGGACATGTACAAATGGCCAATAGAGATACAATTTTGA 2394 0.439 MLRTTTTSISIASEQYSTGWIKIPPSCVPPHRNHSNSSITFSTYYHHYKSLVVKCSNMTVTPKISVNDGNLMVHGKTILSGVPDNIVVTQGSGKGIVTGAFLGATASNIKSLHVFPIGVLQDLRFLCCFRFKLWWMTHRVGTCGRDIPLETQFMLIEIKESKNSPVIYTVLLPLLEGQFRAVLQGNDKNEIEICLESGDPTVETNQGRHIVYMHAGTDPFEVINQAVKAVEKHMQTFLHREKKRLPSFLDWFGWCTWDAFYTDVTAEGIEDGLKSLSEGGASPRFLIIDDGWQQIESKPKDTDCSVQEGAQFATRLTGIKENTKFQKDGESNGLRHVVDQTKQRHNVKYVYVWHALAGYWGGVKPAAIGMEHYDTSLAYPIHSPGVLGNQPDVVMDSLAVHGLGLVHPKKVFDFYNELHAYLASCGVDGVKVDVQNIIETLGSGHGGRVSITRSYHQALETSIARNFRDNGCIACMCHNTDGLYSAKQTAVVRASDDFYPHDPASHTIHVSSVAYNSIFLGEFMQPDWDMFHSLHPAAEYHAAARAISGGPIYVSDKPGMHNFDLLKKLVLPDGSVLRAQLPARPTLDSLFVDPARDGTSLLKIWNLNKCCGVVGVFNCQGAGWCKIEKKNRIHCETPGTLSGSICTSDVDLIAQVAGADWNGDAIVYAYRSGDIIRLPKGASLPVTLKVLEYELLHFYPLKEIAQGISFAPIGLLDMFNTGGAVEHFEIHKGATASASLRVRGSGRFGVYSSQKPVKCVVGDNETDFNYESETGLLTFYMPVSVEDMYKWPIEIQF* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1713 797 Pfam Raffinose synthase or seed imbibition protein Sip1 64 780 IPR008811 -
Mtr1g1713 797 Gene3D Aldolase class I 251 567 IPR013785 -
Mtr1g1713 797 PANTHER - 58 796 IPR008811 -
Mtr1g1713 797 PANTHER GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 2-RELATED 58 796 - -
Mtr1g1713 797 SUPERFAMILY (Trans)glycosidases 248 574 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1713 Mtr-Chr1 23424641 23432406 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1713 58 605 Glycoside Hydrolase AT3G57520 77.020 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1713 K06617 - gmx:100807861 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1713 1 23424641 23432406 Mtr1g1713 1 23424641 23432406 ECH
Mtr7g2654 7 43233527 43239161 Mtr1g1713 1 23424641 23432406 PCT