Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1702 ATGTCTAACACTTTGAAGGTTTTGGATCCTGCATTCCAGGGAGTGGGTCAGAGATTAGGAACTGAAATATGGAGAATTGAGAATTTTCAACCGGTTCCATTGCCCAAATCTGAATATGGGAAATTCTACATGGGGGATTCATATATCATCTTGCAGACAACACAAGGCAAAGGAGCTGCTTATTTTTATGATTTACACTTTTGGATTGGAAAGGATACGAGTCAGGATGAGGCAGGAACAGCAGCCATTAAAGCTGTTGAACTTGATGCTGCTCTTGGAGGACGGGCGGTGCAGCACAGAGAGATTCAAGGACATGAATCTGACAATTTTTTGTCATATTTTAGGCCATGTATTATACCATTAGAGGGGGGTGTTGCATCTGGATTTAGAAAACCTGAAGAGGAGGAGTTTGAAACACGCTTGTATGTATGCAGAGGGAAAAGAGTTGTCAGGTTGAAACAGGTCCCGTTTGCAAGGTCATCATTGAACCATGATGATGTGTTCATTCTTGACACCGACGATAAGATTTATCAATTCAATGGTGCAAATTCCAATATTCAGGAAAGAGCCAAGGCTTTGGAAGTGGTACAGTTTCTGAAAGAAGAATATCATGAAGGGAAATGTGACGTTGCAATTGTTGATGATGGAAAGTTAGACACTGAGTCAGATTCAGGTGAATTTTGGCTACTCTTTGGTGGTTTTGCTCCCATTGCAAAGAAGGTAATCAGTGAGGATGATATCATTCCAGAGGCAATTCCTGCTCAATTGTATAGTATCATTGATCGTGAAGTCAAGTCTGAGGAAGGTGAACTTTCTAAGTCCCTGTTGGAGAACAACAAGTGCTATTTGCTGGACTGTGGTGCTGAGGTATTTATCTGGTTTGGCCGGGGAACACAAGTGGAAGAACGGAAAGCAGCTTGCCAAGCTGCTGAGGAGTTTGTTTCTGGCCAAAATAGGCCAAAATCTACAAGGATAACAAGGATTACTCAAGGTTATGAGACACGTTCATTTAAGTCTAACTTTGATTCTTGGCCATCAGGATCTGCTAGTACTGTTGCCGAGGATGGAAAAGGGAAAGTTACAGCATTGCTGAAGCAACAAGGGATGGGTGTAAAAGGAATGACAAAAAGTACCCCTGTAAATGAGGAAATTCCACATTTGCTTGAAGAGGGTGGAAAGATGGAGGCATGGAGAATCGATGGAAGTGACAAGACCTCATTACCGAACGAGGACATTGGTAAATTTCATAGTGGAGATTGTTACATTGTGCTGTACACATACCATTCTGGTGAGAGGAAAGAAGACTACTTCTTGTGCTGCTGGTTTGGCAAAGATAGTATTGAGGAGGACCAAACAGTGGCTATTCGGCTGGCTAATACAATGTCCAACTCTTTGAAGGGTAGACCTGTTCAGGGTCGCATATACGAGGGTAAAGAGTCACCACAATTTGTTGCTCTTTTCCATCCCATGGTAGTTCTTAAGGGAGGTTTGAGCACTGGATACAAAAAATTCATAGCTGACAAAGGTTCATCAGATGAGACATACACAGAAGAATCCGTTGCGCTTATCCGAATCACTGGAACTTCCATCCATAACAATAAGGCAGCACAAGTTGATGCAGTGCCAACGTCATTGAATTCTTCCGACTGTTTTGTCTTGCAATCGAGCTCTACAGTTTTCACTTGGCATGGGAATAAATGTTCCATCGAACAGCAGCAGCTAGCAGCAAAGGTCGCAGAATTTCTAAGGCCAGGAGTTGCTTTAAAGCATGCTAAAGAAGGTACAGAAAGCTCAGCTTTCTGGCTTGCATTAGGAGGAAAACAAAACTACACCAGCAAGAAAGTTACTAATGAGGTTGTTAGAGATCCACATCTGTTCACCTTATCATTTTATAAAGGAAAGTTACATGTAGAGGAGGTTTACAACTTCTCCCAAGATGATTTGTTAACAGAGGATATCCTCGTACTCGACACACACGCAGAAGTGTTTGTTTGGATTGGTCAGTGTGTTGACCCTAAAGAAAAGCAAAATGCTTTTGAAATTGGCCAGAAATACATAGATATGGCTGCATCTCTGGAAGGACTATCTCCACGTGTACCCTTATATAAAGTAACAGAAGGGAACGAACCTTTCTTTTTCACTACATACTTTTCATGGGATTGGGATTATACAAGAGCTAAGGTTCATGGGAACTCATTCCAGAAACAGGTGTCTCTACTCTTTGGGATTGGCCATGCTGTGGAGGAAAAATCAAACGGGTCAAGTGGAGGGGGGCCAAGACAAAGGGCAGAAGCTTTGGCTGCTTTAACTTCTGCTTTTAAATCATCGCTTGAGAAAACAACGAGTATGTCACAAGAGAGATTGAATGGCTTAAACCATGGAGGACCAAGACAAAGAGCGGAAGCTTTAGCTGCCTTAAACTCTGCATTTAGTTCTTCATCAACGACAAAGAAAGTTACTCCTAGGCCATCTGTAAAAGGTCAAGGATCACAAAGAGCAGCAGCTGTAGCTGCTCTTTCGTCAGTTCTTACTGCTGAGAAGAAGAAACAATCACCTGATACCTCTCCTGTGGCCAGTGACAGTCCTGTTCCAGAGAGTAGCATTTCAGAAGCTAAAAGTGAAAGTGAATATTCTGAAGTTGATGAAGCTACAGAAGCCAAGGAAGTGGAAGAAGTTTCTCCTGATTCCGATAGCAATGGGGGTCTGGAATCTGAACAAGAAAATGTGGAGGATGGAGATAATGACCAAAGTAGTCAGAGGACATTCAGTTATGATCAATTAAAGACTACAGCAGGAAAAAATGTGTCTAGAATTGATCTTAAACGGAGAGAGGCCTATCTTTCAGACGAAGATTTTGAAACTGTGTTTGGAATGGTAAAAGAAGCATTTTATAAGTTGCCAAGATGGAAGCGAGATCTGCTGAAAAAGAAATATGAATTGTTCTAG 2946 0.4189 MSNTLKVLDPAFQGVGQRLGTEIWRIENFQPVPLPKSEYGKFYMGDSYIILQTTQGKGAAYFYDLHFWIGKDTSQDEAGTAAIKAVELDAALGGRAVQHREIQGHESDNFLSYFRPCIIPLEGGVASGFRKPEEEEFETRLYVCRGKRVVRLKQVPFARSSLNHDDVFILDTDDKIYQFNGANSNIQERAKALEVVQFLKEEYHEGKCDVAIVDDGKLDTESDSGEFWLLFGGFAPIAKKVISEDDIIPEAIPAQLYSIIDREVKSEEGELSKSLLENNKCYLLDCGAEVFIWFGRGTQVEERKAACQAAEEFVSGQNRPKSTRITRITQGYETRSFKSNFDSWPSGSASTVAEDGKGKVTALLKQQGMGVKGMTKSTPVNEEIPHLLEEGGKMEAWRIDGSDKTSLPNEDIGKFHSGDCYIVLYTYHSGERKEDYFLCCWFGKDSIEEDQTVAIRLANTMSNSLKGRPVQGRIYEGKESPQFVALFHPMVVLKGGLSTGYKKFIADKGSSDETYTEESVALIRITGTSIHNNKAAQVDAVPTSLNSSDCFVLQSSSTVFTWHGNKCSIEQQQLAAKVAEFLRPGVALKHAKEGTESSAFWLALGGKQNYTSKKVTNEVVRDPHLFTLSFYKGKLHVEEVYNFSQDDLLTEDILVLDTHAEVFVWIGQCVDPKEKQNAFEIGQKYIDMAASLEGLSPRVPLYKVTEGNEPFFFTTYFSWDWDYTRAKVHGNSFQKQVSLLFGIGHAVEEKSNGSSGGGPRQRAEALAALTSAFKSSLEKTTSMSQERLNGLNHGGPRQRAEALAALNSAFSSSSTTKKVTPRPSVKGQGSQRAAAVAALSSVLTAEKKKQSPDTSPVASDSPVPESSISEAKSESEYSEVDEATEAKEVEEVSPDSDSNGGLESEQENVEDGDNDQSSQRTFSYDQLKTTAGKNVSRIDLKRREAYLSDEDFETVFGMVKEAFYKLPRWKRDLLKKKYELF* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1702 981 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Mtr1g1702 981 Gene3D Severin 6 131 IPR029006 -
Mtr1g1702 981 MobiDBLite consensus disorder prediction 810 827 - -
Mtr1g1702 981 MobiDBLite consensus disorder prediction 810 832 - -
Mtr1g1702 981 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 437 455 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 470 490 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 533 553 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 593 612 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 645 667 IPR007122 GO:0051015
Mtr1g1702 981 PRINTS Gelsolin family signature 674 693 IPR007122 GO:0051015
Mtr1g1702 981 Gene3D Villin headpiece domain 903 981 IPR036886 GO:0003779|GO:0007010
Mtr1g1702 981 Pfam Gelsolin repeat 265 337 IPR007123 -
Mtr1g1702 981 Pfam Gelsolin repeat 639 710 IPR007123 -
Mtr1g1702 981 Pfam Gelsolin repeat 533 583 IPR007123 -
Mtr1g1702 981 Pfam Gelsolin repeat 29 111 IPR007123 -
Mtr1g1702 981 Pfam Gelsolin repeat 409 483 IPR007123 -
Mtr1g1702 981 Pfam Gelsolin repeat 150 217 IPR007123 -
Mtr1g1702 981 SMART VILL_6 252 344 IPR007122 GO:0051015
Mtr1g1702 981 SMART VILL_6 19 117 IPR007122 GO:0051015
Mtr1g1702 981 SMART VILL_6 139 234 IPR007122 GO:0051015
Mtr1g1702 981 SMART VILL_6 624 719 IPR007122 GO:0051015
Mtr1g1702 981 SMART VILL_6 518 607 IPR007122 GO:0051015
Mtr1g1702 981 SMART VILL_6 392 490 IPR007122 GO:0051015
Mtr1g1702 981 MobiDBLite consensus disorder prediction 844 871 - -
Mtr1g1702 981 MobiDBLite consensus disorder prediction 844 925 - -
Mtr1g1702 981 PANTHER VILLIN-3-LIKE ISOFORM X1 1 981 - -
Mtr1g1702 981 MobiDBLite consensus disorder prediction 779 798 - -
Mtr1g1702 981 CDD gelsolin_S6_like 622 722 - -
Mtr1g1702 981 CDD gelsolin_S4_like 386 487 - -
Mtr1g1702 981 Pfam Villin headpiece domain 946 981 IPR003128 GO:0003779|GO:0007010
Mtr1g1702 981 SUPERFAMILY Actin depolymerizing proteins 511 615 - -
Mtr1g1702 981 SUPERFAMILY Actin depolymerizing proteins 134 241 - -
Mtr1g1702 981 Gene3D Severin 132 243 IPR029006 -
Mtr1g1702 981 CDD gelsolin_S5_like 519 609 - -
Mtr1g1702 981 SMART VHP_1 946 981 IPR003128 GO:0003779|GO:0007010
Mtr1g1702 981 Gene3D Severin 520 613 IPR029006 -
Mtr1g1702 981 SUPERFAMILY Actin depolymerizing proteins 223 346 - -
Mtr1g1702 981 Gene3D Severin 386 519 IPR029006 -
Mtr1g1702 981 Gene3D Severin 614 735 IPR029006 -
Mtr1g1702 981 SUPERFAMILY VHP, Villin headpiece domain 915 981 IPR036886 GO:0003779|GO:0007010
Mtr1g1702 981 MobiDBLite consensus disorder prediction 872 894 - -
Mtr1g1702 981 CDD gelsolin_S1_like 12 124 - -
Mtr1g1702 981 PANTHER VILLIN 1 981 IPR007122 GO:0051015
Mtr1g1702 981 CDD gelsolin_S2_like 138 232 - -
Mtr1g1702 981 ProSiteProfiles Headpiece (HP) domain profile. 916 981 IPR003128 GO:0003779|GO:0007010
Mtr1g1702 981 SUPERFAMILY Actin depolymerizing proteins 596 719 - -
Mtr1g1702 981 CDD gelsolin_S3_like 267 343 - -
Mtr1g1702 981 Gene3D Severin 253 354 IPR029006 -
Mtr1g1702 981 SUPERFAMILY Actin depolymerizing proteins 383 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1702 Mtr-Chr1 22982488 23007649 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1702 - - gmx:100788765 1596.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2633 7 43026856 43038628 Mtr1g1702 1 22982488 23007649 PCT