Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1340 ATGCCAATGGACGAAGGCATCACAATTGAGTACACACAAGATGGGACTATTGATCTTAATGGAAAACCTGTTCTAAGATCCAAGACAGGTCGTTGGAAAGCTTGCTCATTCCTTGTTGTGTATGGCATATTTGAAAGAATGGCTTACTATGGAATATCATCAAATTTGTTTGTCTATTTGACAAAGAAGCTTCACCAAGGCACTGTCACCTCTTCTAACAATGTCACCAATTGGATTGGCACCATTTTTATGACTCCAATATTAGGTGCTTACATTGCTGATGCTCATCTTGGCCGCTATTGGACTTTTGTCATTTCCGCGCTTATCTATTTATCGGGTATGTGTCTGCTTACACTATCAGTTTCCCTTCCAAGCCTAAAGCCACCTAAATGCCATGAAATGGATGTTACAAAATGCAAGGAAGCTTCCACACAAACACTAGTTGTGTTCTATACTGCACTCTACATTTTAGCAGTGGGAACAGGTGGAACCAAACCCAACATTTCCACCATTGGTGCTGACCAATTTGATGATTTTGACCCTAAAGAAAAAGCACTTAAGCTCTCATTCTTCAATTGGTGGATGTCCTACATTGTCATGGGGTCACTATTTGCATTTACAATTCTAGTGTATGTACAAGATAATGTGAGTTGGACTCTTGGTTATGCTCTTCCAACAATTGGCCTTGCAATATCAATCATCACATTCTTGGCAGGAACACCATTTTATAGACACAAATTGATTAAAGGGAGTCCTTTCATTAGCATGGCTAAGGTATTTGTGGCAGCTATAAGAAAATTTGATATAGTTGTTCCTAATGACCCTAAAGAATTATATGAGCTTAGTTTGAAAGAGTATACAAAGAAAGGCAAATTCAAGATTGATCTCACTCAAACATTCAGATTCCTTAACAAGGCATGTGTGGACACTGGTTCAAGTGCAAGTGATGAGTGGATGTTATGCACAGTAACACAAGTGGAAGAAACCAAACAAATCCTTAGCTTAGTCCCTATTTGGGTTGCAACATTTATTCCAAGTGCAATGATAGCTCAAATAAATACCCTTTTTGTAAAACAAGGAACTACTCTTAACAGATCCATTGGCAACTTCCATATTCCACCATCAAGTTTAGCTGCATTTACAATTTTGACCATGATTATCACTTACATACTCTATGAAAGTTTCATTGTCAAGATTATGCAAAAGTTGACTAAGAATCCTAGAGGGATTACACTCCTTCAAAGAATGAGCATAGGGTTCATAATCCACATAGTGATAATGATAGTTGCATTCATGATTGAAAGACAAAGACTTAGTGTGGTCAAAAAACATGAAGTTCCATTAAGCATATTCATTTTGCTTCCACAATTTATACTTATGGGAGTGGCTGAAGCACTTTTAGAGGGTGCAAAAATGGAGTTTTTCTATGATCAAGCACCAGAAAGCATGAAGAGCCTTGGAACATCATACTCATTAACTACTACTGGAATTGGTAGTTTTCTCAGCACTTTTCTTCTCTCAGCAGTTTCACATGTCACTGAGAAACACGGTCGCCGAGGGTGGATTTTGAATAACTTGAATGCTTCTCATCTTGATTACTACTATGCATTTTTGGCTATACTAAATGTCATAAACTTTGTCTTCTTTGTGGTTGTTTCAAAGTTCTATGTGCATAGAGCTGACATTTCAAATTCTCTAAAAGTTCTTGAAGCAAAACTAACAGAGAAGAAAATATCAAACCATATTTTACCATGA 1755 0.3721 MPMDEGITIEYTQDGTIDLNGKPVLRSKTGRWKACSFLVVYGIFERMAYYGISSNLFVYLTKKLHQGTVTSSNNVTNWIGTIFMTPILGAYIADAHLGRYWTFVISALIYLSGMCLLTLSVSLPSLKPPKCHEMDVTKCKEASTQTLVVFYTALYILAVGTGGTKPNISTIGADQFDDFDPKEKALKLSFFNWWMSYIVMGSLFAFTILVYVQDNVSWTLGYALPTIGLAISIITFLAGTPFYRHKLIKGSPFISMAKVFVAAIRKFDIVVPNDPKELYELSLKEYTKKGKFKIDLTQTFRFLNKACVDTGSSASDEWMLCTVTQVEETKQILSLVPIWVATFIPSAMIAQINTLFVKQGTTLNRSIGNFHIPPSSLAAFTILTMIITYILYESFIVKIMQKLTKNPRGITLLQRMSIGFIIHIVIMIVAFMIERQRLSVVKKHEVPLSIFILLPQFILMGVAEALLEGAKMEFFYDQAPESMKSLGTSYSLTTTGIGSFLSTFLLSAVSHVTEKHGRRGWILNNLNASHLDYYYAFLAILNVINFVFFVVVSKFYVHRADISNSLKVLEAKLTEKKISNHILP* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1340 584 Pfam POT family 100 522 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr1g1340 584 Gene3D MFS general substrate transporter like domains 5 563 IPR036259 -
Mtr1g1340 584 PANTHER PEPTIDE TRANSPORTER 15 568 - -
Mtr1g1340 584 SUPERFAMILY MFS general substrate transporter 25 555 IPR036259 -
Mtr1g1340 584 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 15 568 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1340 Mtr-Chr1 16112013 16117897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1340 5 572 Organic Solute Cotransporters AT5G46040 60.485 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1340 - - mtr:MTR_1g041885 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2932 7 46122300 46126527 Mtr1g1340 1 16112013 16117897 PCT