Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1338 ATGGAAGAGGGAAGGGTAGTGAGTGAGTTCACAGAAGATGGAACTGTTGATCTTAAAGGGAAACCTATTCTCAAATCTAAAACTGGTTGTTGGAAAGCTTGTTCCTTCTTTGTTGTGTATGAAGTATTTGAGAGAATGGCTTATTATGGGATATCATCAAATTTGATCTTATATTTAACAAATAAGCTTCATCAAGGTACTGTGACCTCTTCTACCAATGTCACCAATTGGGCTGGCACCATGTGGATCACTCCAATATTAGGTGCTTATGTTGCTGATACCTACCTTGGCCGTTATTGGACTTTTGTCACTGCCTCTTTCATCTATCTATTGGGTATGTCTATGCTTACACTATCAGTTTCTCTTCCAAGCCTAAAACCACCTGAGTGTCATGAAATGGATGTGACAAAATGCAAGGAAGCTTCCACACTACAGCTAGTTGTGTTCTATGGTGCACTCTACACTCTAGCAGTGGGAACAGGTGGAACAAAGGCTAACATTTCCACTATTGGTGCTGATCAATTTGATGAGTTTGACACAAAAGAGAAGAAACATAAACTCTCATTCTTCAATTGGTGGATGTTCAGCATCGTCTTTGGGACTCTTCTTGCAAATTCTGTCTTAGTCTACATACAAGATAATGTTGGTTGGACTCTTGGATATGCACTTCCAACTCTTGGACTTGGAATATCTATCATAACATTTTTGGCAGGCACACAATTCTATAGACATAAATTACCTGCAGGGAGTCCCTTCACTAAAATGGCTAAGGTCATTGTGGCTGCAATAAAGAAATGGAATGTGTCTATTCCTAGTGACCCTAAAGAACTTTATGAGCTAGATTTGGAAGAGTATGCAAAGAAAGGAAATGTTAGAATTGATTCCACTCCCACATTGAGGTTCCTCAACAAGGCATGTGTCAAGACTAATTCAAGTACTAGTACAGCGAAATTGTGTCCCGTTACACACGTAGAGGAGACCAAACAAATGCTAAGAATGATCCCAATTTTAGCTACAACATTAATTCCTAGTACAATGGTTGCTCAAATAAATACACTCTTTGTGAAGCAAGGAACAACACTTGATAGAGACATTGGGAGTTTCCAAATTCCACCAGCAAGTTTAGGTACATTTGTGACACTATCAATGCTTATGAGTGTTATACTTTATGACCGTTTCTTTGTCAAGATTATGCAAAAATGGACTAAAAACCCTAGAGGAATTACTCTACTTCAAAGGATGGGCATAGGCATGATAATTCATATAATGATTATGGTAGTTGCAACTTTCACTGAAAGATATAGGCTTAGTGTAGCCAAAGAACATGGAGTAGTTGAAAATGGAGGATTGGTTCCATTGAGCATATTCATTTTGCTTCCACAATTTATACTTATGGGAACAGCTGAAGCATTCATAGAGGTTGCTAAAATTGAGTTCTTCTATGATCAAGCTCCAGAAAGCATGAAGAGTCTTGGCACTTCTTATTCATTGACTAGCTTAGGTATTGGAAGTTTTATAAGTACTTTTCTTCTATCAACAGTTTCACACATCACTGAGGAACATGGTCACAAAGGGTGGATTTTGAATAATCTTAATGCTTCTCATCTTGATTACTACTATGCATTTTTGGCAATACTAAATGTCTTGAACTTTATCTTCTTTTGTATTGTTACAAAGTATTATGTATATAGAGCTGAAATTTCAGATTCCATAAAAGTGCTTGCAGAAGAATTGAAGTAG 1740 0.373 MEEGRVVSEFTEDGTVDLKGKPILKSKTGCWKACSFFVVYEVFERMAYYGISSNLILYLTNKLHQGTVTSSTNVTNWAGTMWITPILGAYVADTYLGRYWTFVTASFIYLLGMSMLTLSVSLPSLKPPECHEMDVTKCKEASTLQLVVFYGALYTLAVGTGGTKANISTIGADQFDEFDTKEKKHKLSFFNWWMFSIVFGTLLANSVLVYIQDNVGWTLGYALPTLGLGISIITFLAGTQFYRHKLPAGSPFTKMAKVIVAAIKKWNVSIPSDPKELYELDLEEYAKKGNVRIDSTPTLRFLNKACVKTNSSTSTAKLCPVTHVEETKQMLRMIPILATTLIPSTMVAQINTLFVKQGTTLDRDIGSFQIPPASLGTFVTLSMLMSVILYDRFFVKIMQKWTKNPRGITLLQRMGIGMIIHIMIMVVATFTERYRLSVAKEHGVVENGGLVPLSIFILLPQFILMGTAEAFIEVAKIEFFYDQAPESMKSLGTSYSLTSLGIGSFISTFLLSTVSHITEEHGHKGWILNNLNASHLDYYYAFLAILNVLNFIFFCIVTKYYVYRAEISDSIKVLAEELK* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1338 579 CDD MFS_NPF5 31 563 IPR044739 GO:0042937|GO:0042938|GO:0071916
Mtr1g1338 579 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 14 570 IPR000109 GO:0016020|GO:0022857|GO:0055085
Mtr1g1338 579 Gene3D MFS general substrate transporter like domains 5 569 IPR036259 -
Mtr1g1338 579 PANTHER PEPTIDE TRANSPORTER 14 570 - -
Mtr1g1338 579 SUPERFAMILY MFS general substrate transporter 26 559 IPR036259 -
Mtr1g1338 579 Pfam POT family 99 527 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1338 Mtr-Chr1 16084160 16088365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1338 6 577 Organic Solute Cotransporters AT5G46040 64.983 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1338 - - gmx:100813385 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2933 7 46134580 46137158 Mtr1g1338 1 16084160 16088365 PCT