Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1108 ATGGCGGAGATTGAAACGCAGAAGATAGATCCAGAGACAGAGTTTCTAGCATCGAAGAGAGAAACCGGAACCGAATGGGAAACCTTCAAAGAAAACGTGAGACCATTGAAACGAGGTCGTAATGTTAACATTCTCAATCACGCTCTCAAATGTCACACCGACAATTACCTCAAGAAATCTCTTATTCAACAACGAAGAAAACTTATTGAAGCCATTGATGATTACAAAGGCGAAGATCCTCTTCTCCCTTGGTTAGAGTGTATGAAGTGGGTTCAAGAAGCGTTTCCTCCAGGTGGAGATAGCTCAGGGCTGGTGGTGATTTATGAGCAATGTGTTCGTGCTTTTTGGCATTCGGAACGGTATAAGGAAGATTTGCGATATCTCAAAGTGTGGCTTGAATATGCAGAAAATTGCTTTGATAAGGAAGTTATATATTCTTTTTTGGATGCAAATGAAATTGGAAAAACTCATTCCGATTTCTACATTTCATATGCTTTGCACTTGGAATCCAAGAACAAGTTTAAAGCTGCTAACCAGACATTTGAACTTGGCATAAATAGGAATGCTCAACCCATTGAAAAACTGAAAGCTGCTTATAGAAAATTTCTTGTTCGCTCAATGTCAAGGACAAAACCTATAGATGACCCAGTGGAAAAAGAGGCACCTGTGCGTAGCTTTGGAACTCTTCTTGCAAAGGGAGATAATGGTGCGCCCTTGGCTCCTTTGAGCAGTAATCGTTCTTCTAAGCCCTTGGCCCCTTTGAACAGTAACCTTTCTGTTAAGAATGATAGGACTCGAGCAGCTCCACTTTCCATTTATAAAGATTCAAATGCCAATGCTGAGACCTGTCCACCTCAGCCAGATCCGTCACACTCTTGGCTCAAACTTGGTGGTCGTGCCGAAAGAAACAAGGAAAACAATGCAATTCCTGCAAAATGGAAATCCTTTAAGGTCCCACAACGACCTGGAACTAGGGCTACAGTGGTTGGTGCAAGTGCCTGCATCCCGGTGTTTGTTGATGAAGAATATCAAGGTTCATTAAATCCGAAAGCAGAGGGTAAGTCCTCAAATTTGAAGACTAGGCAAGACGACGAAAAGGACTTGAAAAGAGAAACCGAGTTACTAAGGAAGGATCCATTACGCAACTTCCCGCATAGCAGCCTCCCCAGATAA 1173 0.4246 MAEIETQKIDPETEFLASKRETGTEWETFKENVRPLKRGRNVNILNHALKCHTDNYLKKSLIQQRRKLIEAIDDYKGEDPLLPWLECMKWVQEAFPPGGDSSGLVVIYEQCVRAFWHSERYKEDLRYLKVWLEYAENCFDKEVIYSFLDANEIGKTHSDFYISYALHLESKNKFKAANQTFELGINRNAQPIEKLKAAYRKFLVRSMSRTKPIDDPVEKEAPVRSFGTLLAKGDNGAPLAPLSSNRSSKPLAPLNSNLSVKNDRTRAAPLSIYKDSNANAETCPPQPDPSHSWLKLGGRAERNKENNAIPAKWKSFKVPQRPGTRATVVGASACIPVFVDEEYQGSLNPKAEGKSSNLKTRQDDEKDLKRETELLRKDPLRNFPHSSLPR* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1108 390 Gene3D - 21 205 - -
Mtr1g1108 390 PANTHER MITOTIC SPINDLE CHECKPOINT PROTEIN BUBR1 23 390 - -
Mtr1g1108 390 MobiDBLite consensus disorder prediction 356 380 - -
Mtr1g1108 390 Coils Coil 58 78 - -
Mtr1g1108 390 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 23 390 IPR015661 GO:0007094
Mtr1g1108 390 SMART mad3_bub1_i 61 185 IPR013212 -
Mtr1g1108 390 MobiDBLite consensus disorder prediction 240 257 - -
Mtr1g1108 390 MobiDBLite consensus disorder prediction 237 257 - -
Mtr1g1108 390 MobiDBLite consensus disorder prediction 345 390 - -
Mtr1g1108 390 Pfam Mad3/BUB1 homology region 1 63 185 IPR013212 -
Mtr1g1108 390 ProSiteProfiles BUB1 N-terminal domain profile. 68 225 IPR013212 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1108 Mtr-Chr1 12599666 12603766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1108 K02178 - gmx:100783684 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1108 1 12599666 12603766 Mtr1g1108 1 12599666 12603766 ECH