Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1022 ATGGCTGATGCAACAACAGACTTTGCACTCACCAAGCTCAAAAAGTCTGTTGAAAACCTTGGTTCTTCTACACAGGGTTATGGGGACCCTACACTGATGAGGTTTTTGATTGCTCGATCAATGGATTCAGATAAAGCAGCAAAGATGTTTGTCCAATGGCAGAAATGGAGGGCTACTATGGTGCCTAATGATGGGTTCATTTCAGATTCTGAAGTTCCTGATGAATTGGAAACTAGAAAGATCTTTTTGCAGGGTTTGTCTAAGGATAAATATCCTGTGATGATTGTCCAAGCAAGTAGACATTTCCCTTCCAAGGATCAGATTCAATTCAAGAAATTTATTGTACATTTACTGGACAAGACAATTGCGAGTGCTTTCAAGGGAAGGGAGGTAGGAAATGAAAAGTTGATTGGGGTTCTGGATCTGCAGGGTATTTCGTATAAGAATGTTGACGCACGTGGTTTAATTACAGGATTTCAATTTTTACAGTCTTACTACCCTGAATGTTTAGCGAAGTGCTATATTTTACATATGCCATGGTTTTTTGTGAGTGTTTGGAGATTTGTTTCCGGCTTCCTAGACAAGGCAACACAAGAAAAGATTGTAATTATAAGCAACGAGGAAGAGAAAAAGTTGTTCGTAAGTGAAGTTGGCGAAGACATTCTCCCAGAAGAGTATGGTGGAAGAGCAAAGCTTGTACCTATCCAAGAGGTTGAAGTGAAACCCCCGGAAAACGGAAGAACGACTTGA 750 0.4027 MADATTDFALTKLKKSVENLGSSTQGYGDPTLMRFLIARSMDSDKAAKMFVQWQKWRATMVPNDGFISDSEVPDELETRKIFLQGLSKDKYPVMIVQASRHFPSKDQIQFKKFIVHLLDKTIASAFKGREVGNEKLIGVLDLQGISYKNVDARGLITGFQFLQSYYPECLAKCYILHMPWFFVSVWRFVSGFLDKATQEKIVIISNEEEKKLFVSEVGEDILPEEYGGRAKLVPIQEVEVKPPENGRTT* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1022 249 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 69 234 IPR001251 -
Mtr1g1022 249 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 3 241 - -
Mtr1g1022 249 SUPERFAMILY CRAL/TRIO domain 69 231 IPR036865 -
Mtr1g1022 249 SUPERFAMILY CRAL/TRIO N-terminal domain 7 64 IPR036273 -
Mtr1g1022 249 Pfam CRAL/TRIO domain 77 228 IPR001251 -
Mtr1g1022 249 PANTHER OS03G0850700 PROTEIN 3 241 - -
Mtr1g1022 249 Gene3D - 3 242 IPR036865 -
Mtr1g1022 249 SMART sec14_4 75 231 IPR001251 -
Mtr1g1022 249 CDD SEC14 82 228 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1022 Mtr-Chr1 11602100 11607995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1022 13 205 Acyl Lipid Metabolism Gene Families AT5G47730 28.230 1.34e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1022 - - gmx:100811048 389.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1022 1 11602100 11607995 Mtr1g1022 1 11602100 11607995 ECH