Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1003 ATGTTCTCCAAGACCAAAATCAACACTTTTTTCTGCTACTACCTCAACAACAATTTCAACCTTTACAATCACACAAGATCTATATCCAGTCTCAAAGTTGTATGGCGCAAGGATCCATCACTAGACCAAGCCATAGAGCAAGATAAACGCTTCAAACAATGTTTCCGCGTCGTCAAAGAAGTTCTCAACGAACCAGGTCAAGTTATTCCTTTACGCTACCTCGAAAAACGCCGTCAAAGGATGCGACTCAAGGTTAAAATCGACACCTTTTTGAATCAAAACCCTTTTTTATTCGATGTCTACTATGATCGCATCAAGCCCAAAACCAAGCCCGTTAAATTTCTTCGTGTCAGCGATCATCTTCTTCAGTTTCTGGAGGAAGAGAAACGAATTTATAAGGAGAATGAACCGTTAATTGTTTCCAAGTTGTGTAAATTGTTGATGATGTCAAAGGATAAGGTTGTTAGTGCTGATAAATTGCTTCATGTGAAGAGGGAATTTGGTTTCCCTAATGATTTTTTGGTTGATTTGGTTCCTAGGTATCCGGAATATTTTAGGTTAACTGGTTTACCCGGCGAGGGAAAATCTTTTCTTGAGTTGGTTAATTGGAATCCTGAGTTTGCGAAATCTGTTGTTGAGAAAAGGGCTGAAGAAGAAAGTAGTGCTACTGGGATTAGGGTTAGGCCTAGTTTCAATGTAAAGCTTCCTCCAGGATTTGTGTTGAAGAAGGAGATGCGGGAGTGGATTAGGGATTGGATGGAGCTTGATTATGTATCTCCTTATGAGGACGTTTCTCATTTTGAGCAATCCTCAAGAGAAATGGAGAAGAGGTCTGTTGGGGTGTTTCATGAATTGCTTTCTCTTTCTTTGTATAAGAGGATTCCTGTGCCGATTCTTGGAAAGTTTTGTGATGAGTATAGGTTTTCGAATGCTTTTTCAAGCGCTTTTACAAGGCATTCTGGTATATTCTATCTCTCGTTGAAAGGTGGGATTGAAACTGCAATGCTGAGAGAAGCATATGAAGGGGATAAGTTGATTCACATTGATCCACTGCTTCAGATAAAAGATAGATTTGCTGAGTTGCTGAACGAGGGTTGGCGGCTAAGAGCGGAGCAGTTGAAATTGAAACAAGAGAAAATTAAGCAAGATATGGAACTTGTGGCCACAAGTTACTGA 1176 0.3997 MFSKTKINTFFCYYLNNNFNLYNHTRSISSLKVVWRKDPSLDQAIEQDKRFKQCFRVVKEVLNEPGQVIPLRYLEKRRQRMRLKVKIDTFLNQNPFLFDVYYDRIKPKTKPVKFLRVSDHLLQFLEEEKRIYKENEPLIVSKLCKLLMMSKDKVVSADKLLHVKREFGFPNDFLVDLVPRYPEYFRLTGLPGEGKSFLELVNWNPEFAKSVVEKRAEEESSATGIRVRPSFNVKLPPGFVLKKEMREWIRDWMELDYVSPYEDVSHFEQSSREMEKRSVGVFHELLSLSLYKRIPVPILGKFCDEYRFSNAFSSAFTRHSGIFYLSLKGGIETAMLREAYEGDKLIHIDPLLQIKDRFAELLNEGWRLRAEQLKLKQEKIKQDMELVATSY* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1003 391 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN 17 387 - -
Mtr1g1003 391 Pfam Plant organelle RNA recognition domain 37 366 IPR021099 GO:0003723
Mtr1g1003 391 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 17 387 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1003 Mtr-Chr1 11460788 11465584 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1003 - - lang:109336290 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1003 1 11460788 11465584 Mtr1g1003 1 11460788 11465584 ECH