Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0987 ATGGCTATTGCTGTGCTGCTTCTTTTTTACCTTCTTTCAATCTCTTTATCTTTTCATGGAGATGCTTATATAGGTGTCAACATTGGCACAGATGTAACCAACATGCCAAGTCCAACGGAAACCGTGGCCCTTCTCAAGGCTCAAAACATCCAACATGTGAGACTCTTTGATGCTGACAAATCTATGCTTCTTGCACTTGCCAAGACCGGAATCCAAGTAATTGTTTCTGTTCCTAATGATGAGCTACTCGGAATCGGTCAATCCAATGCAACTGCCGCAAATTGGGTTGCTCGTAATGTCATAGCTCATGTCCCTTCAACCAACATTACTGCCATAGCTGTCGGTTCCGAAGTCTTAACATCACTCCCAAATGCAGCTCCTGTTCTCGTATCCGCACTACAATTCATTCAGTCTGCACTTGTTGCAGCTAATCTTGATGATCAAATTAAAGTATCTACTCCACTTTCTACTTCCATCATACTCGACTCTTTCCCACCTTCTCAAGCGTTTTTCAATCGAACTTGGGATCCGGTCATGTCTCCTTTACTTAAATTTTTGCAGTCGACCGGTTCTTATCTTATGCTCAATGTATATCCTTATTATGATTACATGCAATCCAATGATGTAATCCCTCTAGATTATGCTCTATTCCGTCCCTTACCGCCGAATAAGGAAGCTGTTGATAGTAACACTCTCCTGCATTATACAAATGTTTTTGATGCAGTTATTGATGCTGCTTATTTTGCAATGTCGTATTTGAAGTTTACTAATATCCCTATTTTAGTCACCGAGTCAGGATGGCCCTCCAAAGGTGGTTCGTCCGAGCCGGACGCAACTCCTGATAATGCCAACACCTACAACAGTAATCTCATTCGGCATGTTTTGAACAATACTGGGACTCCTAAACAACCTAAAGTCACTGTTAGTACATATATTTACGAGCTTTATAACGAAGACTTGAGATCAGGTCCGGCATCTGAAAGCAATTGGGGGCTTTTTTATGCAAACGGAGCACCAGTTTATACCCTACACTTGACCGGTGCTGGTACTGTATTTGCAAACGATACAACAAACCAAACATTTTGTGTCGCTAAGAGTAATGCCGATAGTAAGATGATACAGGCGGCACTTGATTGGGCTTGTGGACCAGGGAAGGTGGATTGTTCACCTTTGTTGCACGGCCAACCGTGTTCTGAACCGGATAATGTAGTTGCGCATGCTACATATGCTTTTAATGCTTATTATCAGAAGATGGATAAATCTCCTGGGAGTTGTGATTTCAAAGGAGTTGCCTCTGTCACCACCACAAATCCAAGTCATGGTTCCTGTAGATTTGCAGGAAGTGGCGGTAAAAACGGCACCAACATAAACGGCACAGCACTTGCCCCTGCTATCAACTCCACAAATTCAGGCTCTTTTTCACAATACTACAACGGTGGATTTTTCACCAGCTATATGATTCTTGCACTACTTTTGAGTGCACTTGTTGTCTTGTAA 1497 0.4242 MAIAVLLLFYLLSISLSFHGDAYIGVNIGTDVTNMPSPTETVALLKAQNIQHVRLFDADKSMLLALAKTGIQVIVSVPNDELLGIGQSNATAANWVARNVIAHVPSTNITAIAVGSEVLTSLPNAAPVLVSALQFIQSALVAANLDDQIKVSTPLSTSIILDSFPPSQAFFNRTWDPVMSPLLKFLQSTGSYLMLNVYPYYDYMQSNDVIPLDYALFRPLPPNKEAVDSNTLLHYTNVFDAVIDAAYFAMSYLKFTNIPILVTESGWPSKGGSSEPDATPDNANTYNSNLIRHVLNNTGTPKQPKVTVSTYIYELYNEDLRSGPASESNWGLFYANGAPVYTLHLTGAGTVFANDTTNQTFCVAKSNADSKMIQAALDWACGPGKVDCSPLLHGQPCSEPDNVVAHATYAFNAYYQKMDKSPGSCDFKGVASVTTTNPSHGSCRFAGSGGKNGTNINGTALAPAINSTNSGSFSQYYNGGFFTSYMILALLLSALVVL* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0987 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 5 489 IPR044965 GO:0004553|GO:0005975
Mtr1g0987 498 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 5 489 - -
Mtr1g0987 498 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Mtr1g0987 498 Gene3D Glycosidases 23 350 - -
Mtr1g0987 498 SMART X8_cls 360 445 IPR012946 -
Mtr1g0987 498 SUPERFAMILY (Trans)glycosidases 24 344 IPR017853 -
Mtr1g0987 498 Pfam X8 domain 361 431 IPR012946 -
Mtr1g0987 498 Gene3D - 354 456 - -
Mtr1g0987 498 Pfam Glycosyl hydrolases family 17 24 344 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0987 Mtr-Chr1 11306004 11310643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0987 21 439 Glycoside Hydrolase AT2G01630 78.520 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0987 K19891 - gmx:100789267 844.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0987 1 11306004 11310643 Mtr1g0987 1 11306004 11310643 ECH