Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0918 ATGAAATTCATGGAAAAATTTGAGCTTCTTAGGCACATGTCACTTGTGTCTTTGATTGTGCTTATTTTATGTATTATTACACCCCCAATATTTGCTACAAGGAATTGTGATTTTCCTGCCATATTTAGCTTTGGTGCTTCAAACGTTGACACTGGTGGTTTGGCTGCTGCCTTTCAAGCACCACCTTCTCCATATGGAGAGACTTATTTTCATAGATCAACTGGAAGATTTTCTGATGGTCGAATCATTCTTGATTTCATAGCACAGAGCTTTGGACTTCCCTATCTAAGTCCATATCTTAATTCTCTTGGGTCTAACTTCACACATGGTGCAAACTTCGCAACAGGAGGATCAACAATCAATATCCCTAATAGTATTATACCTAATGGGATATTTAGTCCATTTTCTCTTCAAATTCAGTACATTCAATTCAAAGATTTCATATCCAAAACAAATCTCATTCGGGATCAAGGAGGTGTATTTGCAACTTTGATCCCCAAAGAAGACTATTTTTCCAAAGCCTTATACACATTTGATATTGGTCAAAATGATCTTATTGGTGGTTATTTTGGTAACAAGACTATAAAACAAGTCAATGCTACTGTACCCGATATAGTAAACAATTTCATAGTGAATATCAAGAACATATACAATTTAGGGGCTAGGTCATTTTGGATACACAGCACAGTACCAAGTGGTTGCACTCCTACCATTTTGGCTAATTTTCCATCTGCAATAAAGGATAGTTATGGTTGTGCAAAGCAATACAATGAAGTATCTCAATATTTTAATTTAAAGTTGAAGAAAGCATTAGCTCAACTTCGTGTCGATCTTCCTCTTGCTGCAATAACATATGTTGATATCTACTCTCCTAAGTACTCTCTTTTTCAAAATCCAAAAAAATATGGATTTGAGCTTCCACATGTGGCATGTTGTGGCTATGGAGGAAAGTACAACATTCGTGTTGGCTGTGGAGAAACCATAAACATAAATGGTACAAAAATTGTTGCTGGATCGTGTAAAAACCCATCTACTAGAATCATTTGGGATGGTTCCCACTTCACAGAAGCAGCTAACAAGATTGTCTTTGATCAAATATCTACCGGAGCTTTCTCTGATCCTCCTATTTCTCTAAATAGGGCATGTACCAGTTTTGTTGTATATTAA 1167 0.3608 MKFMEKFELLRHMSLVSLIVLILCIITPPIFATRNCDFPAIFSFGASNVDTGGLAAAFQAPPSPYGETYFHRSTGRFSDGRIILDFIAQSFGLPYLSPYLNSLGSNFTHGANFATGGSTINIPNSIIPNGIFSPFSLQIQYIQFKDFISKTNLIRDQGGVFATLIPKEDYFSKALYTFDIGQNDLIGGYFGNKTIKQVNATVPDIVNNFIVNIKNIYNLGARSFWIHSTVPSGCTPTILANFPSAIKDSYGCAKQYNEVSQYFNLKLKKALAQLRVDLPLAAITYVDIYSPKYSLFQNPKKYGFELPHVACCGYGGKYNIRVGCGETININGTKIVAGSCKNPSTRIIWDGSHFTEAANKIVFDQISTGAFSDPPISLNRACTSFVVY* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0918 388 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 10 385 - -
Mtr1g0918 388 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 385 - -
Mtr1g0918 388 CDD SGNH_plant_lipase_like 39 369 IPR035669 -
Mtr1g0918 388 Pfam GDSL-like Lipase/Acylhydrolase 41 366 IPR001087 GO:0016788
Mtr1g0918 388 Gene3D SGNH hydrolase 31 369 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0918 Mtr-Chr1 10580925 10582967 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0918 39 373 Acyl Lipid Metabolism Gene Families AT4G10950 29.191 1.48e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0918 - - cam:101514585 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0918 1 10580925 10582967 Mtr1g0918 1 10580925 10582967 ECH