Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0912 ATGACGGATAAGAAGAGATGGTTATGGAAGCGAAAGTCTTCCGAGAAGAGTCCGGGCGAAGCTGAGAGTTCAGGATCAGTTTCCTCTCATTCTGAGAAGTTTTCTGATGAACAGGAAGTATCAAAGGAATCTTCCAATGGAAGCAATTATTCACCTGATGTCACCTCAAAAGCTGTAGCTTGTGCTGAAGATGTTGATGATTGTTCAGTTATCAATGAACAACTTCCCGATGACATTGCATCAACACCTTTACCTACTACATGCATCATAAATGGTGGTTCATCAGAGGTAGATGCAAATGGAGAAAATGAAAATAAATCAAATGAAAAAGAAGATGATCTAAATGATGGTTCGAGGGATATATCTGAGAAGCTATCTGCTGCTATTGTTAATATATCGAATGGAAAAGAAGAAGATCTAAATGACGGGTCGAGGGATATATCTGAGAAGCTATCTGCTGCTCTTGTTAATGTCAATGCCAAAGAAGACTTGGTTAAACAGCATGCAAAAGTCGCTGAAGAAGCCATAGCAGGCTGGGAAAAGGCTGAAAATGAAGTAGCAGTTTTAAAGAAGAACCTTGACACAGTCACTCTCAGGAATTCATCTCTTGAAGATAGAGTCACTCATCTAGATGGAGCACTTAAGGAGTGCGTTAGGCAGCTAAGACAAACAAGAGAAGAGCACGAAGCGAATATCCAAGACGCCGTAGCCGAAAAGACTCACGAATTGGAATCAGACAAAGTTAAACTCGAGAGCAAGCTCGTTGAGCTCCAGAAGAAATTAGATGCTTCAAATACCAAATCTTCTATTGAACGTGATATGCGTCAAAAGGTCGAATGGTTGGAGACTGAGAATATGGCTCTCAGGCACGAGATCCTAGTTCAATCGGAAGAGCTGAAAATCAGAACTGTTGAGAGGGATTTGAGCACCCAAGCAGCCGAGACAGCTAGTAAGCAACATTTAGAAAGCATCAAGAAAGTAGCCAAGCTTGAGTCTGAGTGTCGGAGATTGAAGACAATAGCTTCAAAAGATCATAAATCCATTGCTTCATCCTCATTTTGCGTTGAATCTCTCACAGATAGTCAGTCGGACAGTACGGAGAGGCTAACTGCGGTGGATTGTGATATCCTCAAGATGAATGGTTCAGAAAACAGGTGTGAACCAAGTTGTTCTGACTCGTGGGCGTCTGCGCTAATTGCCGAGCTTGATCAATTCAAGAATGAAAAGTGCTGCCGACAAGCTGATCCATCAAGTTCTCTTAAAATAGATCTGATGGACGATTTTCTTGAAATGGAACGACTCGCTGCATTGCCTGAGACTAAGAACGCAAGCAGCTTTGTTGAGGAGTTGGTTGTTGCCGATAAATGCGTTGACAAAGAAAGTACTCTCAGAGCTGAATTTGACATCATGACTCAGCAAATGGATGAACTAAAAGGGAAGTTAGAGAAGGTGCAAGCAGATAAAGCTGAACTAGAGATAGCTTTGATGAAAAGTGAAGAGTGTATCGAGGAGTCGCATCTTCAGTTAAAGGAGGCAGTTCAGAAATTGGAGGAGCTTCAAATTGAGCTAGAAAATGCCTACAAATCAAAGCAAACGATAGAAAATCGCCTAATGAGCATGGAGGCAGACTCTCACACGCTATCTTCCAAGGTCAACTTATTAGAAGCAGAGGTTGATAAGGAAAGGGCTTTGTTGCATGAAATTGTGATGAAGTGTAAGGACCTGGAGGAAGAGTTAGAAAGCAAGTCTGCAATGCTTGGCTTATTAGAAGCTGACGTTGATAAGGAGAAGAACATGTCACATGAAATTGCAATAAAATGTGAGGGTCTAGAGGAAGAGCTAGAAAGCAAATGTGCAAAGCTTGAATTGTTAGAATCAGAGATTGTTAAGGAGAGGGCTGCGTCAGACGAAATTGCGGCCAAGTGTAAGGACCTGGTGGAAGAGTTTGAAAGGAAATGTGCGAAGGTTGATTTCTTAGAAGCAGAGGTTGAAAAGGAGAGGGCCATGTCTGAAGAAATTGCAGTGAAGTGTAGGGAATTGGAGGAAGAGATACTCAGGCCAACAGCTAGCTTGTATGGAGAAAAGAAAATCAAGCAGGAGGACCTAGCACTCGCTGCCGGAAAGCTTGCCGAATGCCAGAAAACAATAGCATCTTTGGGGAACCAGCTGAAATCCCTGGCCACACTTGAGGATTTCCTTATTGACACTGCTAGCATTCCCGCAAGTCCAGCAATCATTGCTCATGCTGGTGGAGAGATGTGGAGGATGCATTCAAATGGCACATTTTCACCTAAGAGAGACTCCACTTCTTCTAGGTTGGCTGATGGTAGCTCCGGTGCTTCCCTGAACAAATATGAGGAAAGCTCACCACTTTCATCGACTTCTTCTACTTCATCAGCGACCTTGCCAAATCACGCCAGTTCTGAGAAGGGTCGAATTGGTTTCGCAAAATTTTTCTCGCGAACCAAGAGTGGTATTCGGCTAGAAATTTAG 2493 0.4292 MTDKKRWLWKRKSSEKSPGEAESSGSVSSHSEKFSDEQEVSKESSNGSNYSPDVTSKAVACAEDVDDCSVINEQLPDDIASTPLPTTCIINGGSSEVDANGENENKSNEKEDDLNDGSRDISEKLSAAIVNISNGKEEDLNDGSRDISEKLSAALVNVNAKEDLVKQHAKVAEEAIAGWEKAENEVAVLKKNLDTVTLRNSSLEDRVTHLDGALKECVRQLRQTREEHEANIQDAVAEKTHELESDKVKLESKLVELQKKLDASNTKSSIERDMRQKVEWLETENMALRHEILVQSEELKIRTVERDLSTQAAETASKQHLESIKKVAKLESECRRLKTIASKDHKSIASSSFCVESLTDSQSDSTERLTAVDCDILKMNGSENRCEPSCSDSWASALIAELDQFKNEKCCRQADPSSSLKIDLMDDFLEMERLAALPETKNASSFVEELVVADKCVDKESTLRAEFDIMTQQMDELKGKLEKVQADKAELEIALMKSEECIEESHLQLKEAVQKLEELQIELENAYKSKQTIENRLMSMEADSHTLSSKVNLLEAEVDKERALLHEIVMKCKDLEEELESKSAMLGLLEADVDKEKNMSHEIAIKCEGLEEELESKCAKLELLESEIVKERAASDEIAAKCKDLVEEFERKCAKVDFLEAEVEKERAMSEEIAVKCRELEEEILRPTASLYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPAIIAHAGGEMWRMHSNGTFSPKRDSTSSRLADGSSGASLNKYEESSPLSSTSSTSSATLPNHASSEKGRIGFAKFFSRTKSGIRLEI* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0912 830 SUPERFAMILY Tropomyosin 462 662 - -
Mtr1g0912 830 Coils Coil 218 238 - -
Mtr1g0912 830 Coils Coil 558 592 - -
Mtr1g0912 830 Coils Coil 186 206 - -
Mtr1g0912 830 Coils Coil 467 543 - -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 75 101 - -
Mtr1g0912 830 Pfam Filament-like plant protein, long coiled-coil 387 445 IPR008587 -
Mtr1g0912 830 Pfam Filament-like plant protein, long coiled-coil 648 728 IPR008587 -
Mtr1g0912 830 Pfam Filament-like plant protein, long coiled-coil 273 343 IPR008587 -
Mtr1g0912 830 Pfam Filament-like plant protein, long coiled-coil 161 265 IPR008587 -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 1 18 - -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 75 118 - -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 757 807 - -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 761 806 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 620 829 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 136 531 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 3 134 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 581 617 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 525 583 - -
Mtr1g0912 830 Coils Coil 663 683 - -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 102 118 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 620 829 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 3 134 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 525 583 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 581 617 - -
Mtr1g0912 830 PANTHER FILAMENT-LIKE PLANT PROTEIN 1-RELATED 136 531 - -
Mtr1g0912 830 Coils Coil 607 627 - -
Mtr1g0912 830 MobiDBLite consensus disorder prediction 1 54 - -
Mtr1g0912 830 Coils Coil 240 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0912 Mtr-Chr1 10530264 10535262 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0912 - - mtr:MTR_1g030010 1548.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0912 1 10530264 10535262 Mtr1g0912 1 10530264 10535262 ECH