Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0903 ATGGATTTTAAAACAAAACCATTCATCACTCTTTTTCTCTTTCTGCTATTTTCTTCCATTTTCTCACTCACTTTCTCAGCTGCTAATAAACCCTTCAGCACCGATAAGTCTCACCGCGTTGGTTCTTCTGCTGTTTTCCGTGTTCATGGGAATGTTTACCCTCTTGGGTATTATACTGTCTCTCTCAACATTGGCTATCCTCCAAAGCTTTATGACCTTGATATCGACTCAGGTAGTGACCTCACTTGGGTTCAGTGTGATGCACCATGTAAAGGTTGCACTAAGCCTCGTGATCAACTTTATAAACCCAGCAACAACCTTGTGCAATGTGTGGACCAGTTGTGTGCTGCAGTGCATTTAACATCAGACCATCACTGTTCTTCCCCAGATGAACAGTGTGACTATGAGGTTGAGTATGCAGATCAGGGATCCTCTCTGGGGGTCCTTGTCCGAGACTACGTTCCTCTTCAATTCACTAATGGATCTGTTATACGCCCAAGAATAGCCTTTGGATGTGGATATGATCAAAAGCATTCTGGTACGACATCCCCACCTTCTACAACAGGAGTCCTTGGCCTTGGCAATGGAAGAACAAGTATTTTGTCCCAGCTTCACTCTCTAGGTCTGATTCGCAATGTAGTAGGTCATTGCTTAAGTGGTCGAGGAGGAGGATTTTTGTTTTTTGGAGATGATCTCATTCCCTCATCAGGAATTGTTTGGACACCCATGTTACCTAGTTCCTCAGAAAAACACTACAGTTTAGGACAAGCAGAATTGCTTTTCAATGGAAAGCCTACTACTATTAAGGGTCTTGACCTTATTTTCGATAGTGGAAGCTCTTACACATACTTCAATTCCAAAGCTTATCAGACTATTGTTGATCAGGTAACTAATGACTTAAAGGGAAACCAGTTGAAAAGAGCAACTGAGGATCCGTCTCTTCCAATTTGTTGGAAGGGTTCAAAGTCTTTCAAAACTGTAAGTGATGTTAAAAACTATTTCAAGCCGTTAGCATTGAGATTCAAAAAAGTGAAGAATTCGCAGATGCTAATACCACCAGAAGGCTATCTCATTGTCACAAAACATGGAAATGTTTGCTTGGGAATTCTGGATGGTACTGAAGTAGGACTAGGAGACCTTAACATCATAGGAGACATATCTTTGCAAGATAAAATGGTGATTTATGACAACGAGAGACAACAGATTGGATGGATTTCTTATGATTGTGATAGGATTCCCAATATCGATCGTGATTTTGAAGATGATGCTTTTCCACACCCTTATGCAGCCAATTTTGGCATCTTTGACGACAGGTGCGCTGCATAG 1326 0.4133 MDFKTKPFITLFLFLLFSSIFSLTFSAANKPFSTDKSHRVGSSAVFRVHGNVYPLGYYTVSLNIGYPPKLYDLDIDSGSDLTWVQCDAPCKGCTKPRDQLYKPSNNLVQCVDQLCAAVHLTSDHHCSSPDEQCDYEVEYADQGSSLGVLVRDYVPLQFTNGSVIRPRIAFGCGYDQKHSGTTSPPSTTGVLGLGNGRTSILSQLHSLGLIRNVVGHCLSGRGGGFLFFGDDLIPSSGIVWTPMLPSSSEKHYSLGQAELLFNGKPTTIKGLDLIFDSGSSYTYFNSKAYQTIVDQVTNDLKGNQLKRATEDPSLPICWKGSKSFKTVSDVKNYFKPLALRFKKVKNSQMLIPPEGYLIVTKHGNVCLGILDGTEVGLGDLNIIGDISLQDKMVIYDNERQQIGWISYDCDRIPNIDRDFEDDAFPHPYAANFGIFDDRCAA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0903 441 Pfam Xylanase inhibitor C-terminal 272 404 IPR032799 -
Mtr1g0903 441 Gene3D Acid Proteases 234 414 IPR021109 -
Mtr1g0903 441 PRINTS Pepsin (A1) aspartic protease family signature 64 84 IPR001461 GO:0004190|GO:0006508
Mtr1g0903 441 PRINTS Pepsin (A1) aspartic protease family signature 273 284 IPR001461 GO:0004190|GO:0006508
Mtr1g0903 441 PRINTS Pepsin (A1) aspartic protease family signature 381 396 IPR001461 GO:0004190|GO:0006508
Mtr1g0903 441 Pfam Xylanase inhibitor N-terminal 58 230 IPR032861 -
Mtr1g0903 441 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 8 412 - -
Mtr1g0903 441 PANTHER ASPARTYL PROTEASES 8 412 IPR001461 GO:0004190|GO:0006508
Mtr1g0903 441 SUPERFAMILY Acid proteases 50 414 IPR021109 -
Mtr1g0903 441 Gene3D Acid Proteases 33 230 IPR021109 -
Mtr1g0903 441 ProSiteProfiles Peptidase family A1 domain profile. 58 405 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0903 Mtr-Chr1 10407146 10410829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0903 42 413 Miscellaneous Gene Families AT1G44130 60.590 1.12e-173 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0903 - - aprc:113846122 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0903 1 10407146 10410829 Mtr1g0903 1 10407146 10410829 ECH