Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0899 ATGAAAGTAACATGGAAGAACACGAAGAAGAAGAAACCTTGTTTACCCTCTTTATCACACTTCACCGAACTTCCCTTTGAGCAGGAAAACGATACTACTACTGAACATGATTCTTCTGATGGAACAACCGTTCGTTCTACCGATTCTGAACAATCATCACAATTAGCTACGCAGTTTCAAACTCAAGGAGACAATCTTGCTATGGAGGGGAAGTATAGAGAAGCATTGGGTAAATGGGAAGCTGCTCTTACATTGGCACCCGATGTTCCAGCTTTGCATGAACAGAAGGCCCAAGTTTTACTAGAAATTGGAGATGCTTGGAATGCTTTAAAGGCTGCAAGTCGAGCTACTGAATTGAAACCATCGTGGGCTGAGGCTTGGGTCACACTTGGCAGAGCGCAGCTGAATTATGGCGAGCCAGATAATGCTATTGAAAGCTTTGACAGAGCTTTAGCTCTCAAGCCTGATTATGAAGAAGCACAAGATGATAGAAAAACCGCATCACGTCTAATAAAGAAGAGAAAGCAACTTCACTCGTCAGGATTGAGTGAAATTCAAAATCGTTATACTGTAGGTGATAAGAATGAAAGCTCATGA 597 0.4204 MKVTWKNTKKKKPCLPSLSHFTELPFEQENDTTTEHDSSDGTTVRSTDSEQSSQLATQFQTQGDNLAMEGKYREALGKWEAALTLAPDVPALHEQKAQVLLEIGDAWNALKAASRATELKPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRKTASRLIKKRKQLHSSGLSEIQNRYTVGDKNESS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0899 198 MobiDBLite consensus disorder prediction 44 65 - -
Mtr1g0899 198 Pfam Tetratricopeptide repeat 124 157 IPR001440 GO:0005515
Mtr1g0899 198 PANTHER OSMOSIS RESPONSIVE FACTOR 1 196 - -
Mtr1g0899 198 MobiDBLite consensus disorder prediction 29 43 - -
Mtr1g0899 198 SMART tpr_5 124 157 IPR019734 GO:0005515
Mtr1g0899 198 SMART tpr_5 56 89 IPR019734 GO:0005515
Mtr1g0899 198 SMART tpr_5 90 123 IPR019734 GO:0005515
Mtr1g0899 198 ProSiteProfiles TPR repeat profile. 124 157 IPR019734 GO:0005515
Mtr1g0899 198 Gene3D Tetratricopeptide repeat domain 45 191 IPR011990 GO:0005515
Mtr1g0899 198 SUPERFAMILY TPR-like 51 175 IPR011990 GO:0005515
Mtr1g0899 198 MobiDBLite consensus disorder prediction 174 198 - -
Mtr1g0899 198 ProSiteProfiles TPR repeat region circular profile. 124 156 - -
Mtr1g0899 198 MobiDBLite consensus disorder prediction 180 198 - -
Mtr1g0899 198 MobiDBLite consensus disorder prediction 1 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0899 63 161 EF-hand Containing Proteins AT2G32450 33.333 1.04e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0899 - - gmx:100305761 293.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0899 1 10358970 10363565 Mtr1g0899 1 10358970 10363565 ECH