Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0896 ATGACCGACGACAACTCCAATCTCTCCGCCGCTGCCGGCGGCGATTCATCACGTCCGCCTTCGACGTTCGTCAAAATAGGTGACCGGACACGTTTCACTGTTGAGCTTCGTGAAGGTGAAACCACAATCGTATCGTGGAAGAAGCTTCTCAAAGATGCTAATAAGGTTAACGATGGATCCTCGTCCGCTGCGATTGAGCAGGTTCCCAAAGCGAACCATGCGCTTGAAGCTCGAATCGGTTCTGGGCAAACTGAGAATAAAGAAGAAGATGCTCCCCAGACAAACCGGTTCAGTGCTGTAATAGAGAAGATTGAACGGCTTTACATGGGTAATGATAGTAGCGACGAGGAGGATCTACCCGTTGTTCCTGATGATCAGTATGATACTGAAGACTCTTTCATTGATGATGCTGAGCTGGATGAATATTTTGAGGTTGATAATTCTGCAATCAAACATGATGGTTTCTTTGTAAACAGGGGGAAATTGGAGCGCCTAAATGAACCTTCGGCATTACCTAATCAACCAGAAAAGAAGAAGCGCCGGAAAGATATATCGAAGAATCCAGGTGAAAACGTTGATGGACATGTACCAAATAAACGTGTAAAAGTGGGCAAGACAGCTGCTGGAAAGACTGCATCATTACCTGTGAAGAATACAGTTGATTCCTCACAGAATTTGGCTGTACCTGGTGAACATGATGAAGACTTGAAATCTCAGAATCAATTCGAGATCTCTGGAATTACTTTGAAAAAGAAAACGGCTGATACTAGACCAATTTCAGATCCTTCTCTCTGTTTGAAAGCATCAAATAATGATGTCCCTTCTGTGGTTGTCTGTTTGAAAGCGTCAGATAATGATGTCCCCTCTGTGGTAGAAGCCAAAGATGCTGATAAACAGAAGACAGGAGTACTTCAATCTAAGACCAGAGTAGATAAGAATAAAGATGCAAGTGGAGTGCACGATACTGCTGATCAGAAGTACCAAGAAAAAAGTGTTTATGCACATTCCAAACCCCAACCTGGACGAACCCCAAGTAGGGCTGATTGTTTAGAAAATACAGGTGGATCAACAGATAAAAATGGCATTGATGAATTACCAGATCTTAACTTGTCTGAGGGAAAATCTGTGATGCAAGCACCAAAATCTAAAAACATGCTAAAAAAAGATTGCTCCGCTTTGAGGCCAAAATCTACAATTCTTGAGAAAGCTGTTCAAGATTTAGAGAAAACGGTTGCAGAATCAAGGCCACCAATTATGGAAAAACAGGAGGTTGATAGCACATCTCAAGCTATTAAACGGAGATTACCCAGGGAAATAAAACTAAAACTTGCTAAAGTTGCTAGATTAGCGCAGGCAAGCCAAGGGAAAGTATCACAGGAGTTAATTAATCGTCTTATGAGTATTCTTGGGCACCTGATTCAGCTCAGAACACTAAAGAGAAACTTGAAAATTATGATCAATATGGGTTTGTCTGCAAAGAAGGAGAAAGATGATAGGTTTCAACAAAAAAAGAAGGAAGTTATTGAGATGATAAAGATGCAGGCCCCATCTATTGACTCCGAGCAACGGCAGCAAGCTGGAGTATCTGGTGATCAAGAATTGGGTTCTGATGGAAAAGCAATATCCAAAAGGAATTTTAGTATGGACACTGCATTGGAGGACAAGATTTGTGATCTCTATGACCTTTTTGTTGATGGATTGGATGAAACTGCAGGTCCGATAATCAGAAAGTTGTATGCTGAGCTAGCTGCACTATGGCCGAATGGTTGCATGGATAACCATGGGATCAAAGGTGCAATTGTCCGGGCAAAAGAGAGGCGCAGAGCATTACACAATAGAAATAAGGATCAGGAGAAAATTAAAAGGAAAAAGTTATTGGCACCTCGACGTGAGGAGAATGTTGAACTTGATACTAGTTCACAGCAGAAAATGCGAGAGCGATTAGCTCCAGAATCTAGCATTCAGACTTCATTGAATAAGGCAGTTTCTAAGACAGTTACAGACGTCCGGGTTCTCAGCCCCCCTGTGAATGTTACAAAAACTGAAAAAGCAAAGGGGAGGAGTTCAAGCCCCGTGAATGGTCCGAACAAAGAAAAAGCAAAGGGGAGGAGTTCAAGCCCTGTGAATGGTTCGAACAAAGAAAAAGCAAAGGGGAGTTCAAACCCTGTGAATGGTCCGAACAAAGAAAAAACAAAGGGGAGTTCAAACCCTGTGAGTGGTCCGAAAAAAGAAAAAGCAAAGGGGAGTTCAAGCTGTTCCCCGGATGATGCCAGGGTTAAAGACGGTGTTTTAACTAAGAAGGTAATGAAGAAGAGAAAGACAGAATCTGAGTTGGAAGGAACTCATTGTCGCCCTCAGAAGCTGGCTTCTTTGAAGGTAGAAGATAGGCCCCAGTCCGTTAAGCAGTCTGCAGTTGTTCCCTCCAAATCAAACATTCAGTCAACATCTCTACCCGGTGTTGAGCAATCAAGCTAG 2475 0.4263 MTDDNSNLSAAAGGDSSRPPSTFVKIGDRTRFTVELREGETTIVSWKKLLKDANKVNDGSSSAAIEQVPKANHALEARIGSGQTENKEEDAPQTNRFSAVIEKIERLYMGNDSSDEEDLPVVPDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERLNEPSALPNQPEKKKRRKDISKNPGENVDGHVPNKRVKVGKTAAGKTASLPVKNTVDSSQNLAVPGEHDEDLKSQNQFEISGITLKKKTADTRPISDPSLCLKASNNDVPSVVVCLKASDNDVPSVVEAKDADKQKTGVLQSKTRVDKNKDASGVHDTADQKYQEKSVYAHSKPQPGRTPSRADCLENTGGSTDKNGIDELPDLNLSEGKSVMQAPKSKNMLKKDCSALRPKSTILEKAVQDLEKTVAESRPPIMEKQEVDSTSQAIKRRLPREIKLKLAKVARLAQASQGKVSQELINRLMSILGHLIQLRTLKRNLKIMINMGLSAKKEKDDRFQQKKKEVIEMIKMQAPSIDSEQRQQAGVSGDQELGSDGKAISKRNFSMDTALEDKICDLYDLFVDGLDETAGPIIRKLYAELAALWPNGCMDNHGIKGAIVRAKERRRALHNRNKDQEKIKRKKLLAPRREENVELDTSSQQKMRERLAPESSIQTSLNKAVSKTVTDVRVLSPPVNVTKTEKAKGRSSSPVNGPNKEKAKGRSSSPVNGSNKEKAKGSSNPVNGPNKEKTKGSSNPVSGPKKEKAKGSSSCSPDDARVKDGVLTKKVMKKRKTESELEGTHCRPQKLASLKVEDRPQSVKQSAVVPSKSNIQSTSLPGVEQSS* 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0896 824 MobiDBLite consensus disorder prediction 608 824 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 759 782 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 161 239 - -
Mtr1g0896 824 Coils Coil 600 620 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 1 25 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 608 644 - -
Mtr1g0896 824 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 734 824 - -
Mtr1g0896 824 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 17 693 - -
Mtr1g0896 824 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 17 693 - -
Mtr1g0896 824 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 734 824 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 1 16 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 311 347 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 173 200 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 645 674 - -
Mtr1g0896 824 Pfam HPC2 and ubinuclein domain 124 163 IPR014840 -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 517 536 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 517 531 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 801 824 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 212 226 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 682 738 - -
Mtr1g0896 824 MobiDBLite consensus disorder prediction 311 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0896 Mtr-Chr1 10299687 10313178 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0896 - - mtr:MTR_1g029680 1604.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0896 1 10299687 10313178 Mtr1g0896 1 10299687 10313178 ECH
Mtr1g0896 1 10299687 10313178 Mtr3g2993 3 43755326 43762615 PCT