Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0886 ATGGCAAAAGTTTGCTGGCCATACTTTGATCCTGAGTACGAGAACTTCAGCAACAGAATCAACCCTCCAAGGGTCTCTATGGACAATGATAGTTGCCATGATTGTACACTGATCAAGATTGATAGCGTCAATAAACCCGGAATTCTGCTGGAAGTCGTGCAAATCCTGACAGACCTTGATTTCATAATTACCAAAGCTTACATATCTTCTGATGGTAGTTGGTTTATGGATGTATTTCATGTCACGGATCAGCAAGGAAAAAAGATAACAGACAACAAAATTATTGACTTCATTGAAAAGGCTCTAGGACCAAAGGGCCGCAAGAGCCCAGAAGGTGTGAAGAGTTGGGAAGGCAAACGGGTTGGCATTCACTCCATTGGTGATCATACAGCCATTGAGCTCATTGGTCGGGACCGCCCAGGTCTTTTGTCTGAGATATCAGCTGTCCTGGCAAGCTTCCAATTCAATGTGATTGCAGCTGAAGTTTGGACTCATAACAGGCGAATAGCATGTGTACTTTATGTCAATGATGCAACAAACCAAGCTGTGGATGATGATTCAAAAAGATTGTCTCTTCTTGACGAGAAGCTCAACCACATCCTTCGTGGTTGTGAGGATGATGACAATGTGGCCCGGACCAGTTTCTCCATGGGTTTCACCTTCACCCACATGGACAGAAGGCTCCACCAAATGTTGTTTGCTGATAGGGATTATGAGAGTGCTGGTGGAGTAACAACAGCAACAAATGTTGATTCTCCTCCCTCTTTCAGGCCCAATATTGAAATAGAACGTATTGAAGAAAAAGGCTACTCAGTGGTTAGTGTGAGATGCAAAGATCGGGCAAAATTGATGTTTGACATTGTCTGCACTCTTACTGACATGGAATATGTTGTTTTTCATGCCTCCATCTCATCTGATGGGCCTTATGCTTCACAGGAGTACTTCATTAGGCACGTGGATGGATGCACACTTGACACTGAAGGGGAGAAAGAAAGGGTCATTAAATGCATTGAAGCAGCTATTCAAAGAAGAGTAAGCGAGGGTGTGAGCCTTGAGCTGTGTGCAAAGGATAGAGTGGGCTTGCTGTCTGAAGTGACTAGGATTCTACGAGAGAACGGCTTAACAGTTTGTAGGGCAGGTGTGTCAACCATAGGAGAGAAAGGACTAAATGTTTTCTATGTGAGAGATGCATATGGGAACCCTGTGGATATGAACATCATTGAAGCACTGCGTAAAGAAATCGGCCAGACTGTGATGGTCAATGTGAAGAAGGTACCAGCCAACACCAAAGCACCAGAAACGTCTCGAGGATGGGCTAGAGTAAGCTTCTTCTTTGGGAACTTGTTCGAAAGGTTCTTGACTTAA 1365 0.4418 MAKVCWPYFDPEYENFSNRINPPRVSMDNDSCHDCTLIKIDSVNKPGILLEVVQILTDLDFIITKAYISSDGSWFMDVFHVTDQQGKKITDNKIIDFIEKALGPKGRKSPEGVKSWEGKRVGIHSIGDHTAIELIGRDRPGLLSEISAVLASFQFNVIAAEVWTHNRRIACVLYVNDATNQAVDDDSKRLSLLDEKLNHILRGCEDDDNVARTSFSMGFTFTHMDRRLHQMLFADRDYESAGGVTTATNVDSPPSFRPNIEIERIEEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHASISSDGPYASQEYFIRHVDGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRAGVSTIGEKGLNVFYVRDAYGNPVDMNIIEALRKEIGQTVMVNVKKVPANTKAPETSRGWARVSFFFGNLFERFLT* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0886 454 ProSiteProfiles ACT domain profile. 350 427 IPR002912 -
Mtr1g0886 454 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 4 454 - -
Mtr1g0886 454 SUPERFAMILY ACT-like 346 415 IPR045865 -
Mtr1g0886 454 ProSiteProfiles ACT domain profile. 37 115 IPR002912 -
Mtr1g0886 454 CDD ACT_ACR_3 270 344 - -
Mtr1g0886 454 Gene3D - 125 202 - -
Mtr1g0886 454 SUPERFAMILY ACT-like 126 198 IPR045865 -
Mtr1g0886 454 CDD ACT_ACR_1 35 106 - -
Mtr1g0886 454 SUPERFAMILY ACT-like 32 104 IPR045865 -
Mtr1g0886 454 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 4 454 IPR040217 -
Mtr1g0886 454 ProSiteProfiles ACT domain profile. 131 215 IPR002912 -
Mtr1g0886 454 Pfam ACT domain 131 176 IPR002912 -
Mtr1g0886 454 Pfam ACT domain 37 85 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0886 Mtr-Chr1 10208946 10216396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0886 - - mtr:MTR_1g029520 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0886 1 10208946 10216396 Mtr1g0886 1 10208946 10216396 ECH